BLASTX nr result

ID: Bupleurum21_contig00038176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038176
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37192.3| unnamed protein product [Vitis vinifera]              222   3e-56
ref|XP_002272156.1| PREDICTED: uncharacterized protein LOC100259...   222   3e-56
ref|XP_003610864.1| hypothetical protein MTR_5g007860 [Medicago ...   221   5e-56
ref|XP_002320610.1| predicted protein [Populus trichocarpa] gi|2...   220   8e-56
emb|CAN77840.1| hypothetical protein VITISV_015561 [Vitis vinifera]   220   1e-55

>emb|CBI37192.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score =  222 bits (565), Expect = 3e-56
 Identities = 100/133 (75%), Positives = 113/133 (84%)
 Frame = -2

Query: 402 DGEYWIDLPNDARRETVKHGNLPSAKLYVHVKPAFGGTFTDIVMWVFCPFNGPGFLKIEF 223
           DGEYWIDLP+   + ++K GNL SAKLYVHVKPA GGTFTDIVMWVFCPFNGP  LK+  
Sbjct: 324 DGEYWIDLPSGDNKRSLKSGNLESAKLYVHVKPASGGTFTDIVMWVFCPFNGPATLKVGL 383

Query: 222 MNVSLGKIGQHVGDWEHFTLRISNFTGELSSIYLSQHSGGQWVEATDLEFIEGNRASIYA 43
           MN++L KIGQHVGDWEHFTLRISNFTGEL SIY SQHSGG WV A DLEFIEGN+A +Y+
Sbjct: 384 MNIALSKIGQHVGDWEHFTLRISNFTGELWSIYFSQHSGGIWVNACDLEFIEGNKAIVYS 443

Query: 42  TKYGHACFPHPGT 4
           ++ GHA FPHPG+
Sbjct: 444 SRSGHASFPHPGS 456


>ref|XP_002272156.1| PREDICTED: uncharacterized protein LOC100259944 [Vitis vinifera]
          Length = 569

 Score =  222 bits (565), Expect = 3e-56
 Identities = 100/133 (75%), Positives = 113/133 (84%)
 Frame = -2

Query: 402 DGEYWIDLPNDARRETVKHGNLPSAKLYVHVKPAFGGTFTDIVMWVFCPFNGPGFLKIEF 223
           DGEYWIDLP+   + ++K GNL SAKLYVHVKPA GGTFTDIVMWVFCPFNGP  LK+  
Sbjct: 324 DGEYWIDLPSGDNKRSLKSGNLESAKLYVHVKPASGGTFTDIVMWVFCPFNGPATLKVGL 383

Query: 222 MNVSLGKIGQHVGDWEHFTLRISNFTGELSSIYLSQHSGGQWVEATDLEFIEGNRASIYA 43
           MN++L KIGQHVGDWEHFTLRISNFTGEL SIY SQHSGG WV A DLEFIEGN+A +Y+
Sbjct: 384 MNIALSKIGQHVGDWEHFTLRISNFTGELWSIYFSQHSGGIWVNACDLEFIEGNKAIVYS 443

Query: 42  TKYGHACFPHPGT 4
           ++ GHA FPHPG+
Sbjct: 444 SRSGHASFPHPGS 456


>ref|XP_003610864.1| hypothetical protein MTR_5g007860 [Medicago truncatula]
           gi|355512199|gb|AES93822.1| hypothetical protein
           MTR_5g007860 [Medicago truncatula]
          Length = 607

 Score =  221 bits (563), Expect = 5e-56
 Identities = 97/134 (72%), Positives = 117/134 (87%), Gaps = 1/134 (0%)
 Frame = -2

Query: 402 DGEYWIDLPND-ARRETVKHGNLPSAKLYVHVKPAFGGTFTDIVMWVFCPFNGPGFLKIE 226
           DGE+WIDLPND +RRE +KHG+L SAKLYVHVKPAFGGTFTDIVMW+FCPFNGP  LK  
Sbjct: 362 DGEFWIDLPNDKSRREFIKHGDLESAKLYVHVKPAFGGTFTDIVMWIFCPFNGPSTLKFG 421

Query: 225 FMNVSLGKIGQHVGDWEHFTLRISNFTGELSSIYLSQHSGGQWVEATDLEFIEGNRASIY 46
             +++  K+G+H+GDWEHFTLRISNFTGEL SIY SQHSGG+WV+A +LE+I+GN+A +Y
Sbjct: 422 MKSMAFSKVGEHIGDWEHFTLRISNFTGELWSIYYSQHSGGKWVDAYELEYIDGNKAIVY 481

Query: 45  ATKYGHACFPHPGT 4
           A+K GHA +PHPGT
Sbjct: 482 ASKNGHASYPHPGT 495


>ref|XP_002320610.1| predicted protein [Populus trichocarpa] gi|222861383|gb|EEE98925.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  220 bits (561), Expect = 8e-56
 Identities = 98/132 (74%), Positives = 114/132 (86%)
 Frame = -2

Query: 402 DGEYWIDLPNDARRETVKHGNLPSAKLYVHVKPAFGGTFTDIVMWVFCPFNGPGFLKIEF 223
           DG +WIDLP+D +R TVK G+L SAKLYVHVKPA GGTFTD+ +WVF PFNGPG LK+  
Sbjct: 323 DGAFWIDLPSDGKRNTVKQGSLESAKLYVHVKPALGGTFTDLAVWVFYPFNGPGTLKVGP 382

Query: 222 MNVSLGKIGQHVGDWEHFTLRISNFTGELSSIYLSQHSGGQWVEATDLEFIEGNRASIYA 43
           +N+SLGKIGQHVGDWEHFTLRI NFTGEL SIY SQHSGG+WV+A DLE+IEGN+A +Y+
Sbjct: 383 LNISLGKIGQHVGDWEHFTLRICNFTGELWSIYFSQHSGGEWVDAYDLEYIEGNKAIVYS 442

Query: 42  TKYGHACFPHPG 7
           +K GHA FPHPG
Sbjct: 443 SKNGHASFPHPG 454


>emb|CAN77840.1| hypothetical protein VITISV_015561 [Vitis vinifera]
          Length = 569

 Score =  220 bits (560), Expect = 1e-55
 Identities = 99/133 (74%), Positives = 111/133 (83%)
 Frame = -2

Query: 402 DGEYWIDLPNDARRETVKHGNLPSAKLYVHVKPAFGGTFTDIVMWVFCPFNGPGFLKIEF 223
           DGEYWIDLP+   + ++K GNL SAKLYVHVKPA GGTFTDIVMWVFCPFNGP  LK+  
Sbjct: 324 DGEYWIDLPSGDNKRSLKSGNLESAKLYVHVKPASGGTFTDIVMWVFCPFNGPATLKVGL 383

Query: 222 MNVSLGKIGQHVGDWEHFTLRISNFTGELSSIYLSQHSGGQWVEATDLEFIEGNRASIYA 43
           MN++L KIGQHVGDWEHFTLRISNFTGEL SIY SQHSGG W  A DLEFIEGN+A +Y+
Sbjct: 384 MNIALSKIGQHVGDWEHFTLRISNFTGELWSIYFSQHSGGIWANACDLEFIEGNKAIVYS 443

Query: 42  TKYGHACFPHPGT 4
            + GHA FPHPG+
Sbjct: 444 ARSGHASFPHPGS 456


Top