BLASTX nr result

ID: Bupleurum21_contig00038170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038170
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   139   2e-31
emb|CBI24516.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28

>ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|222837757|gb|EEE76122.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  140 bits (354), Expect = 8e-32
 Identities = 76/151 (50%), Positives = 101/151 (66%)
 Frame = -1

Query: 454 QLVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVY 275
           QL L++LQAIAKNGCG+D SS   S    ST  L+ +I  LL EI    L L ++A  +Y
Sbjct: 427 QLCLLMLQAIAKNGCGLDCSSLTNSDKINSTLALEQEIELLLREIARSDLNLGNVAGGIY 486

Query: 274 VSALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGL 95
           VSAL   G  ++AL C++ M++ GC PLLF FNS+IK   Q+G  E  KSLI+ MQN G+
Sbjct: 487 VSALCEGGKTESALDCLENMVNAGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWGI 546

Query: 94  LPNLTTYLIIIDEHSKRGDMASTFDILNQME 2
            PNL TYLI+++E+ K+ D+A  F IL QM+
Sbjct: 547 SPNLETYLIMVNEYCKQEDLALAFGILEQMD 577


>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/149 (50%), Positives = 100/149 (67%)
 Frame = -1

Query: 451 LVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVYV 272
           L L +LQAIAKNGC +D+     S   + T D++ +I  LL EIV  +  LA +AF +++
Sbjct: 427 LALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFI 486

Query: 271 SALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGLL 92
           SAL  AG  DAAL  +D M+SLGC+PLL  +NS+IK   QE   E AKSLID MQ  G++
Sbjct: 487 SALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIV 546

Query: 91  PNLTTYLIIIDEHSKRGDMASTFDILNQM 5
           P+L TYLI++ EH   GD+AS F +L+QM
Sbjct: 547 PDLATYLIMVHEHCNHGDLASAFGLLDQM 575


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  139 bits (351), Expect = 2e-31
 Identities = 75/149 (50%), Positives = 100/149 (67%)
 Frame = -1

Query: 451 LVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVYV 272
           L L +LQAIAKNGC +D+     S   + T D++ +I  LL EIV  +  LA +AF +++
Sbjct: 307 LALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFI 366

Query: 271 SALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGLL 92
           SAL  AG  DAAL  +D M+SLGC+PLL  +NS+IK   QE   E AKSLID MQ  G++
Sbjct: 367 SALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIV 426

Query: 91  PNLTTYLIIIDEHSKRGDMASTFDILNQM 5
           P+L TYLI++ EH   GD+AS F +L+QM
Sbjct: 427 PDLATYLIMVHEHCNHGDLASAFGLLDQM 455


>ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|222849237|gb|EEE86784.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score =  137 bits (345), Expect = 9e-31
 Identities = 72/144 (50%), Positives = 98/144 (68%)
 Frame = -1

Query: 433 QAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVYVSALGMA 254
           +AIAKNGCG+D SS   S    S++ L+ +I  +L EI    L L ++A S+YVSAL   
Sbjct: 338 EAIAKNGCGLDRSSLSISDKINSSAGLEQEIELILREIARIDLNLCNVAGSIYVSALCED 397

Query: 253 GNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGLLPNLTTY 74
           G  + AL C   + S GC PLLF FNS+IK   Q+G FE  KSL+D MQN+G++PNL TY
Sbjct: 398 GKTETALACFKNVASAGCIPLLFTFNSLIKRLFQDGLFEDVKSLMDIMQNEGIVPNLETY 457

Query: 73  LIIIDEHSKRGDMASTFDILNQME 2
           LI+++E+ K+ D+AS F IL+QM+
Sbjct: 458 LIMVNEYCKQEDLASAFGILDQMK 481


>ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Cucumis sativus]
          Length = 693

 Score =  129 bits (323), Expect = 3e-28
 Identities = 68/150 (45%), Positives = 97/150 (64%)
 Frame = -1

Query: 454 QLVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVY 275
           QL L +L+ I KNGCG D S    S    ++S+L+ K   +L EI    L LA +AFS+ 
Sbjct: 414 QLALNILETIVKNGCGCDPSVILASAEWQTSSNLEQKFEIVLKEISISDLNLAGVAFSIV 473

Query: 274 VSALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGL 95
           +SAL    N   AL  +  M+SLGC+PLLF +NS+I+  C+E  FE A SLIDHM++  L
Sbjct: 474 ISALCETENFCYALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYSL 533

Query: 94  LPNLTTYLIIIDEHSKRGDMASTFDILNQM 5
            PN TTYLII++E+ ++G++ + + IL +M
Sbjct: 534 FPNTTTYLIIVNEYCRQGNVTAAYHILRKM 563


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