BLASTX nr result
ID: Bupleurum21_contig00038170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00038170 (454 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|2... 140 8e-32 ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi... 139 2e-31 emb|CBI24516.3| unnamed protein product [Vitis vinifera] 139 2e-31 ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|2... 137 9e-31 ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28 >ref|XP_002328242.1| predicted protein [Populus trichocarpa] gi|222837757|gb|EEE76122.1| predicted protein [Populus trichocarpa] Length = 893 Score = 140 bits (354), Expect = 8e-32 Identities = 76/151 (50%), Positives = 101/151 (66%) Frame = -1 Query: 454 QLVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVY 275 QL L++LQAIAKNGCG+D SS S ST L+ +I LL EI L L ++A +Y Sbjct: 427 QLCLLMLQAIAKNGCGLDCSSLTNSDKINSTLALEQEIELLLREIARSDLNLGNVAGGIY 486 Query: 274 VSALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGL 95 VSAL G ++AL C++ M++ GC PLLF FNS+IK Q+G E KSLI+ MQN G+ Sbjct: 487 VSALCEGGKTESALDCLENMVNAGCVPLLFTFNSLIKRLFQDGLSEDVKSLIEIMQNWGI 546 Query: 94 LPNLTTYLIIIDEHSKRGDMASTFDILNQME 2 PNL TYLI+++E+ K+ D+A F IL QM+ Sbjct: 547 SPNLETYLIMVNEYCKQEDLALAFGILEQMD 577 >ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like [Vitis vinifera] Length = 1101 Score = 139 bits (351), Expect = 2e-31 Identities = 75/149 (50%), Positives = 100/149 (67%) Frame = -1 Query: 451 LVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVYV 272 L L +LQAIAKNGC +D+ S + T D++ +I LL EIV + LA +AF +++ Sbjct: 427 LALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFI 486 Query: 271 SALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGLL 92 SAL AG DAAL +D M+SLGC+PLL +NS+IK QE E AKSLID MQ G++ Sbjct: 487 SALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIV 546 Query: 91 PNLTTYLIIIDEHSKRGDMASTFDILNQM 5 P+L TYLI++ EH GD+AS F +L+QM Sbjct: 547 PDLATYLIMVHEHCNHGDLASAFGLLDQM 575 >emb|CBI24516.3| unnamed protein product [Vitis vinifera] Length = 970 Score = 139 bits (351), Expect = 2e-31 Identities = 75/149 (50%), Positives = 100/149 (67%) Frame = -1 Query: 451 LVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVYV 272 L L +LQAIAKNGC +D+ S + T D++ +I LL EIV + LA +AF +++ Sbjct: 307 LALKILQAIAKNGCNLDLCLLSTSATHSPTQDVEQEIECLLGEIVRRNFALADVAFGIFI 366 Query: 271 SALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGLL 92 SAL AG DAAL +D M+SLGC+PLL +NS+IK QE E AKSLID MQ G++ Sbjct: 367 SALCAAGKTDAALLFMDKMVSLGCRPLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIV 426 Query: 91 PNLTTYLIIIDEHSKRGDMASTFDILNQM 5 P+L TYLI++ EH GD+AS F +L+QM Sbjct: 427 PDLATYLIMVHEHCNHGDLASAFGLLDQM 455 >ref|XP_002312829.1| predicted protein [Populus trichocarpa] gi|222849237|gb|EEE86784.1| predicted protein [Populus trichocarpa] Length = 734 Score = 137 bits (345), Expect = 9e-31 Identities = 72/144 (50%), Positives = 98/144 (68%) Frame = -1 Query: 433 QAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVYVSALGMA 254 +AIAKNGCG+D SS S S++ L+ +I +L EI L L ++A S+YVSAL Sbjct: 338 EAIAKNGCGLDRSSLSISDKINSSAGLEQEIELILREIARIDLNLCNVAGSIYVSALCED 397 Query: 253 GNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGLLPNLTTY 74 G + AL C + S GC PLLF FNS+IK Q+G FE KSL+D MQN+G++PNL TY Sbjct: 398 GKTETALACFKNVASAGCIPLLFTFNSLIKRLFQDGLFEDVKSLMDIMQNEGIVPNLETY 457 Query: 73 LIIIDEHSKRGDMASTFDILNQME 2 LI+++E+ K+ D+AS F IL+QM+ Sbjct: 458 LIMVNEYCKQEDLASAFGILDQMK 481 >ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like [Cucumis sativus] Length = 693 Score = 129 bits (323), Expect = 3e-28 Identities = 68/150 (45%), Positives = 97/150 (64%) Frame = -1 Query: 454 QLVLVVLQAIAKNGCGIDISSSFFSGNCTSTSDLKLKINHLLTEIVGCSLPLASMAFSVY 275 QL L +L+ I KNGCG D S S ++S+L+ K +L EI L LA +AFS+ Sbjct: 414 QLALNILETIVKNGCGCDPSVILASAEWQTSSNLEQKFEIVLKEISISDLNLAGVAFSIV 473 Query: 274 VSALGMAGNIDAALGCIDTMISLGCQPLLFAFNSVIKGCCQEGYFELAKSLIDHMQNQGL 95 +SAL N AL + M+SLGC+PLLF +NS+I+ C+E FE A SLIDHM++ L Sbjct: 474 ISALCETENFCYALDYLHNMVSLGCKPLLFTYNSLIRRLCKERLFEDAMSLIDHMKDYSL 533 Query: 94 LPNLTTYLIIIDEHSKRGDMASTFDILNQM 5 PN TTYLII++E+ ++G++ + + IL +M Sbjct: 534 FPNTTTYLIIVNEYCRQGNVTAAYHILRKM 563