BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038137
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helica...   127   1e-27
emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]   126   2e-27
ref|XP_002299703.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago tr...   120   2e-25
ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helica...   117   1e-24

>ref|XP_002279503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Vitis
           vinifera]
          Length = 961

 Score =  127 bits (318), Expect = 1e-27
 Identities = 76/141 (53%), Positives = 92/141 (65%), Gaps = 3/141 (2%)
 Frame = -3

Query: 415 FRLKKVDKGRKVANFTEVLDFKGDEGNVYKQVNKGVKVKSVEVELGDEEFLVEEYESGDE 236
           F   K DKGR   +   +L     E  ++++ +     +   VEL DEEFLVEEYES +E
Sbjct: 156 FVANKADKGRNQGSCRNLLSPNLVEEGIHEKKDSENLGEINGVELNDEEFLVEEYESEEE 215

Query: 235 E---IEMSKRKAGGVFNISSSDEDAEGDKVDDEEEEAGIKIYFCSRTHSQLSQFVKELRK 65
           E   +  SKRKAGGV   SSSDE+ E D   +EE+  G+KIYFCSRTHSQLSQFVKELRK
Sbjct: 216 EGVGVGKSKRKAGGVSINSSSDEEEEDD---NEEDGEGLKIYFCSRTHSQLSQFVKELRK 272

Query: 64  TVFARTLKVVNLGSRKNLCIN 2
           T+F   +KVV LGSRK  CIN
Sbjct: 273 TIFGNEMKVVCLGSRKISCIN 293


>emb|CAN73493.1| hypothetical protein VITISV_017477 [Vitis vinifera]
          Length = 914

 Score =  126 bits (317), Expect = 2e-27
 Identities = 75/138 (54%), Positives = 92/138 (66%), Gaps = 3/138 (2%)
 Frame = -3

Query: 406 KKVDKGRKVANFTEVLDFKGDEGNVYKQVNKGVKVKSVEVELGDEEFLVEEYESGDEE-- 233
           +K DKGR   +   +L     E  ++++ +     +   VEL DEEFLVEEYES +EE  
Sbjct: 93  EKPDKGRNQGSCRNLLSPNPVEEGIHEKKDSENLGEINGVELNDEEFLVEEYESEEEEGV 152

Query: 232 -IEMSKRKAGGVFNISSSDEDAEGDKVDDEEEEAGIKIYFCSRTHSQLSQFVKELRKTVF 56
            +  SKRKAGGV   SSSDE+ E D   +EE+  G+KIYFCSRTHSQLSQFVKELRKT+F
Sbjct: 153 GVGKSKRKAGGVSINSSSDEEEEDD---NEEDGEGLKIYFCSRTHSQLSQFVKELRKTIF 209

Query: 55  ARTLKVVNLGSRKNLCIN 2
              +KVV LGSRK  CIN
Sbjct: 210 GNEMKVVCLGSRKISCIN 227


>ref|XP_002299703.1| predicted protein [Populus trichocarpa] gi|222846961|gb|EEE84508.1|
           predicted protein [Populus trichocarpa]
          Length = 918

 Score =  121 bits (304), Expect = 5e-26
 Identities = 68/111 (61%), Positives = 80/111 (72%), Gaps = 5/111 (4%)
 Frame = -3

Query: 319 NKGVKVKSVEVELGDEEFLVEEYESGDEEI---EMSKRKAGGVFNISSSDEDAEGDKVD- 152
           NK  + K+  VEL D+EFL++EYES +E       SKRKAGGV   SSSDE+ E D  D 
Sbjct: 141 NKCSRKKNDGVELSDDEFLLDEYESEEEGALGGGKSKRKAGGVSISSSSDEEGEKDGPDG 200

Query: 151 -DEEEEAGIKIYFCSRTHSQLSQFVKELRKTVFARTLKVVNLGSRKNLCIN 2
            +EEEE   KIYFCSRTHSQLSQF+KELRKT+F+  + VV LGSRKN CIN
Sbjct: 201 EEEEEEKAFKIYFCSRTHSQLSQFIKELRKTLFSNEINVVCLGSRKNFCIN 251


>ref|XP_003604480.1| ATP-dependent RNA helicase chl1 [Medicago truncatula]
           gi|355505535|gb|AES86677.1| ATP-dependent RNA helicase
           chl1 [Medicago truncatula]
          Length = 1129

 Score =  120 bits (300), Expect = 2e-25
 Identities = 70/130 (53%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
 Frame = -3

Query: 385 KVANFTEVLDFKGDEGNVYKQVNKGVKVKSVEVELGD--EEFLVEEYESGDEEIEMSKRK 212
           K   F  VL   G   N Y++ NK   +K    E+GD  EEFL+EEYES DE    + ++
Sbjct: 114 KKEKFVSVL---GKFDNDYEKSNKSGNLKKKIDEVGDNEEEFLLEEYESEDEGSSGASKR 170

Query: 211 AGGVFNISSSDEDAEGDKVDDEEEEAGIKIYFCSRTHSQLSQFVKELRKTVFARTLKVVN 32
                  SS+ ED  GD  ++EEEE  +K+YFCSRTHSQLSQFVKELRKTVFA  + VV+
Sbjct: 171 KASKSGFSSTSEDESGDD-EEEEEEKKLKVYFCSRTHSQLSQFVKELRKTVFADEMGVVS 229

Query: 31  LGSRKNLCIN 2
           LGSRKNLCIN
Sbjct: 230 LGSRKNLCIN 239


>ref|XP_003529720.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
           8-like [Glycine max]
          Length = 897

 Score =  117 bits (292), Expect = 1e-24
 Identities = 63/99 (63%), Positives = 78/99 (78%), Gaps = 3/99 (3%)
 Frame = -3

Query: 289 VELGDEEFLVEEYESGDEE---IEMSKRKAGGVFNISSSDEDAEGDKVDDEEEEAGIKIY 119
           VE+GD+EFL+EEYES DE+     +SKRKA    + SSS ED  G+  ++EEEE  +K+Y
Sbjct: 135 VEIGDKEFLLEEYESEDEKGLGSVVSKRKAVKT-SFSSSSEDESGE--EEEEEEKKLKVY 191

Query: 118 FCSRTHSQLSQFVKELRKTVFARTLKVVNLGSRKNLCIN 2
           FCSRTHSQLSQF+KELR+TVFA  + VV+LGSRKNLCIN
Sbjct: 192 FCSRTHSQLSQFIKELRRTVFANEMNVVSLGSRKNLCIN 230