BLASTX nr result

ID: Bupleurum21_contig00038122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038122
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
emb|CBI28167.3| unnamed protein product [Vitis vinifera]               55   5e-06
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...    55   5e-06

>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = -2

Query: 200 VNKHAN-VFSDAVVVSRKPAWFKTKICTRWETTGQCRFMENCYYAHGHSEL 51
           VNK  N   +DA   + KP ++KTK+CT+WETTGQC F E C++AHG +EL
Sbjct: 209 VNKPVNNAGADAYRGNMKPVYWKTKLCTKWETTGQCPFGEKCHFAHGQAEL 259


>ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|222848458|gb|EEE86005.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
 Frame = -2

Query: 200 VNKHAN-VFSDAVVVSR-KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAGV 36
           VN+ AN   SDA   +  KP ++KTK+CT+WE TGQC F E C++AHG +EL   GV
Sbjct: 180 VNRPANNAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFAHGLAELQVPGV 236


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
 Frame = -2

Query: 200 VNKHAN-VFSDAVVVSR----KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAG 39
           VN+ AN   SDA   SR    KP ++KTK+CT+WE TGQC F E C++AHG +EL   G
Sbjct: 207 VNRPANNAVSDA---SRSNIIKPVYWKTKLCTKWEITGQCPFGEKCHFAHGLAELQAPG 262


>emb|CBI28167.3| unnamed protein product [Vitis vinifera]
          Length = 248

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = -2

Query: 152 KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAG 39
           KP ++KTK+C +WETTG C F E C++AHG +EL   G
Sbjct: 130 KPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQMTG 167


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = -2

Query: 152 KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAG 39
           KP ++KTK+C +WETTG C F E C++AHG +EL   G
Sbjct: 231 KPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQMTG 268


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