BLASTX nr result
ID: Bupleurum21_contig00038122
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00038122 (321 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm... 62 4e-08 ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-06 emb|CBI28167.3| unnamed protein product [Vitis vinifera] 55 5e-06 ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin... 55 5e-06 >ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis] gi|223536247|gb|EEF37899.1| conserved hypothetical protein [Ricinus communis] Length = 341 Score = 62.4 bits (150), Expect = 4e-08 Identities = 28/51 (54%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Frame = -2 Query: 200 VNKHAN-VFSDAVVVSRKPAWFKTKICTRWETTGQCRFMENCYYAHGHSEL 51 VNK N +DA + KP ++KTK+CT+WETTGQC F E C++AHG +EL Sbjct: 209 VNKPVNNAGADAYRGNMKPVYWKTKLCTKWETTGQCPFGEKCHFAHGQAEL 259 >ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|222848458|gb|EEE86005.1| predicted protein [Populus trichocarpa] Length = 313 Score = 57.8 bits (138), Expect = 9e-07 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%) Frame = -2 Query: 200 VNKHAN-VFSDAVVVSR-KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAGV 36 VN+ AN SDA + KP ++KTK+CT+WE TGQC F E C++AHG +EL GV Sbjct: 180 VNRPANNAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFAHGLAELQVPGV 236 >ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1| predicted protein [Populus trichocarpa] Length = 341 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 5/59 (8%) Frame = -2 Query: 200 VNKHAN-VFSDAVVVSR----KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAG 39 VN+ AN SDA SR KP ++KTK+CT+WE TGQC F E C++AHG +EL G Sbjct: 207 VNRPANNAVSDA---SRSNIIKPVYWKTKLCTKWEITGQCPFGEKCHFAHGLAELQAPG 262 >emb|CBI28167.3| unnamed protein product [Vitis vinifera] Length = 248 Score = 55.5 bits (132), Expect = 5e-06 Identities = 21/38 (55%), Positives = 28/38 (73%) Frame = -2 Query: 152 KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAG 39 KP ++KTK+C +WETTG C F E C++AHG +EL G Sbjct: 130 KPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQMTG 167 >ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like [Vitis vinifera] Length = 349 Score = 55.5 bits (132), Expect = 5e-06 Identities = 21/38 (55%), Positives = 28/38 (73%) Frame = -2 Query: 152 KPAWFKTKICTRWETTGQCRFMENCYYAHGHSELVGAG 39 KP ++KTK+C +WETTG C F E C++AHG +EL G Sbjct: 231 KPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQMTG 268