BLASTX nr result

ID: Bupleurum21_contig00038117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038117
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151946.1| PREDICTED: LOB domain-containing protein 2-l...   138   7e-31
ref|XP_002525150.1| LOB, putative [Ricinus communis] gi|22353560...   134   8e-30
ref|XP_002275844.2| PREDICTED: LOB domain-containing protein 36-...   132   5e-29
ref|XP_002892332.1| hypothetical protein ARALYDRAFT_887830 [Arab...   130   1e-28
ref|XP_003540952.1| PREDICTED: LOB domain-containing protein 2-l...   129   3e-28

>ref|XP_004151946.1| PREDICTED: LOB domain-containing protein 2-like [Cucumis sativus]
          Length = 123

 Score =  138 bits (347), Expect = 7e-31
 Identities = 64/108 (59%), Positives = 81/108 (75%)
 Frame = +2

Query: 20  MQRNNRLGTNPTGACASCRHQRKKCTEKCTLAPFFPVEKNREFLAVHKIFGVSNVTKMLN 199
           MQ++N      T ACA+C+HQRKKC E C LAP+FP E+NREF AVHK+FGVSNVTKM+ 
Sbjct: 1   MQKHNNGVLQGTPACAACKHQRKKCHETCPLAPYFPAERNREFQAVHKVFGVSNVTKMVK 60

Query: 200 RLNIENRKGAVDSLIWEAFSREKDPIFGPFGEYRRVVEELKWYKKELE 343
            +  E+++ AVDSLIWEA  R+ DP+ GP+GEY+RV+EE   Y  E E
Sbjct: 61  NVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEESS-YTSEFE 107


>ref|XP_002525150.1| LOB, putative [Ricinus communis] gi|223535609|gb|EEF37277.1| LOB,
           putative [Ricinus communis]
          Length = 258

 Score =  134 bits (338), Expect = 8e-30
 Identities = 62/110 (56%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
 Frame = +2

Query: 20  MQRNNRLGTNPTG---ACASCRHQRKKCTEKCTLAPFFPVEKNREFLAVHKIFGVSNVTK 190
           MQRN   GT   G   ACASC+HQRKKC E C L P+FP EK++EF AVH++FGVSNV K
Sbjct: 1   MQRNGNNGTAVPGTHAACASCKHQRKKCGEDCILHPYFPAEKSQEFQAVHRVFGVSNVMK 60

Query: 191 MLNRLNIENRKGAVDSLIWEAFSREKDPIFGPFGEYRRVVEELKWYKKEL 340
           ++  + +E+R+   +SLIWEA  R+KDP+ GPFGEY +V +ELK YK  +
Sbjct: 61  LIRSVGVEDRQRLAESLIWEASCRQKDPVLGPFGEYTKVSDELKLYKTHM 110


>ref|XP_002275844.2| PREDICTED: LOB domain-containing protein 36-like [Vitis vinifera]
          Length = 218

 Score =  132 bits (331), Expect = 5e-29
 Identities = 66/160 (41%), Positives = 98/160 (61%), Gaps = 12/160 (7%)
 Frame = +2

Query: 41  GTNPTGACASCRHQRKKCTEKCTLAPFFPVEKNREFLAVHKIFGVSNVTKMLNRLNIEN- 217
           G     ACA+C+HQRK+C E C L+P+FP  K REF AVHK++G+SNV K+L  +  E+ 
Sbjct: 4   GNGSPAACAACKHQRKRCDENCALSPYFPASKTREFQAVHKVYGMSNVIKILRSIESEDE 63

Query: 218 RKGAVDSLIWEAFSREKDPIFGPFGEYRRVVEELKWYKKELEACKSSLTTSGLINEWNGV 397
           R+ A DSL+WEAF R+++P+ G +GE+++VVEELK+YK + +  + +   +  +  WN  
Sbjct: 64  RRRAADSLVWEAFCRQRNPVLGSYGEFKKVVEELKFYKSQNQQLQEAYARASELIGWNRS 123

Query: 398 -----VANTGSAMINDPKYTVMNNNGN------TIYGLYP 484
                 A  G++   +     +NNN N      T YG YP
Sbjct: 124 SNGMNTAAAGASGCRNNGLNYVNNNRNSKLDSTTAYG-YP 162


>ref|XP_002892332.1| hypothetical protein ARALYDRAFT_887830 [Arabidopsis lyrata subsp.
           lyrata] gi|297338174|gb|EFH68591.1| hypothetical protein
           ARALYDRAFT_887830 [Arabidopsis lyrata subsp. lyrata]
          Length = 205

 Score =  130 bits (328), Expect = 1e-28
 Identities = 73/166 (43%), Positives = 90/166 (54%), Gaps = 9/166 (5%)
 Frame = +2

Query: 17  VMQRNNRLGTNPTG---------ACASCRHQRKKCTEKCTLAPFFPVEKNREFLAVHKIF 169
           +MQRN+   T  T          ACASC+HQRKKC  +C L+P+FP  K +EF AVHK+F
Sbjct: 1   MMQRNSNNTTTTTNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVF 60

Query: 170 GVSNVTKMLNRLNIENRKGAVDSLIWEAFSREKDPIFGPFGEYRRVVEELKWYKKELEAC 349
           GVSNV KM+  +  E+R    DSL WEA  R+KDP+ G +GEYRR+ EELK Y       
Sbjct: 61  GVSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLY------- 113

Query: 350 KSSLTTSGLINEWNGVVANTGSAMINDPKYTVMNNNGNTIYGLYPN 487
           KS +    LI  W             D    V +NN N   GL  N
Sbjct: 114 KSLVHNQPLIGNW-------------DNNQRVFSNNSNNKNGLAMN 146


>ref|XP_003540952.1| PREDICTED: LOB domain-containing protein 2-like [Glycine max]
          Length = 197

 Score =  129 bits (324), Expect = 3e-28
 Identities = 63/111 (56%), Positives = 81/111 (72%)
 Frame = +2

Query: 20  MQRNNRLGTNPTGACASCRHQRKKCTEKCTLAPFFPVEKNREFLAVHKIFGVSNVTKMLN 199
           MQRNN  G +P  ACA+C+HQRKKC+E C L P+FP  ++REF AVHK+FGVSN+TK++ 
Sbjct: 1   MQRNNS-GMHP--ACAACKHQRKKCSENCILEPYFPSNRSREFYAVHKVFGVSNITKLVK 57

Query: 200 RLNIENRKGAVDSLIWEAFSREKDPIFGPFGEYRRVVEELKWYKKELEACK 352
               E+R+  VDSLIWEA  R++DPI GP+GEY +V  E   YKK L+  K
Sbjct: 58  NAKEEDRRKVVDSLIWEACCRQRDPIQGPYGEYTKVYNE---YKKVLDEIK 105


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