BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038101
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
emb|CBI25851.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]    97   1e-18
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...    97   2e-18
ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16

>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/90 (53%), Positives = 64/90 (71%)
 Frame = -2

Query: 272 PFYTTKLTPSSADIYWTHLQKKSRNIEHTLNRIKVKLDPLCLISVLERCAVDRPLLGLRF 93
           P ++T L  SSA+ Y+THLQK   NIE TL  ++ KLD  C+  VL RC++ +  LGLRF
Sbjct: 19  PNFSTAL--SSAEKYYTHLQKYGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRF 76

Query: 92  FIWAGLQPSYGHSLYMYNKACSL*KIDRNP 3
           FIWAG+Q  Y HS Y+Y+KAC L +I++NP
Sbjct: 77  FIWAGVQSYYRHSSYLYSKACELFRINQNP 106


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/90 (53%), Positives = 64/90 (71%)
 Frame = -2

Query: 272 PFYTTKLTPSSADIYWTHLQKKSRNIEHTLNRIKVKLDPLCLISVLERCAVDRPLLGLRF 93
           P ++T L  SSA+ Y+THLQK   NIE TL  ++ KLD  C+  VL RC++ +  LGLRF
Sbjct: 25  PNFSTAL--SSAEKYYTHLQKYGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRF 82

Query: 92  FIWAGLQPSYGHSLYMYNKACSL*KIDRNP 3
           FIWAG+Q  Y HS Y+Y+KAC L +I++NP
Sbjct: 83  FIWAGVQSYYRHSSYLYSKACELFRINQNP 112


>emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]
          Length = 577

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/90 (52%), Positives = 64/90 (71%)
 Frame = -2

Query: 272 PFYTTKLTPSSADIYWTHLQKKSRNIEHTLNRIKVKLDPLCLISVLERCAVDRPLLGLRF 93
           P ++T L+P  A+ Y+THLQK   NIE TL  ++ KLD  C+  VL RC++ +  LGLRF
Sbjct: 19  PNFSTALSP--AEKYYTHLQKYGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRF 76

Query: 92  FIWAGLQPSYGHSLYMYNKACSL*KIDRNP 3
           FIWAG+Q  Y HS Y+Y+KAC L +I++NP
Sbjct: 77  FIWAGVQSYYRHSSYLYSKACELFRINQNP 106


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/109 (44%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
 Frame = -2

Query: 317 MSLFSFYRYLSTTSIP----FYTTKLTPSSADIYWTHLQKKSRNIEHTLNRIKVKLDPLC 150
           MS  S  R+LS +  P      T   T S AD  +THLQ    N+E +LN IK KLD  C
Sbjct: 1   MSFSSLPRFLSLSIAPKTSKISTLHFTTSLADKLYTHLQNNPNNVEKSLNSIKPKLDTRC 60

Query: 149 LISVLERCAVDRPLLGLRFFIWAGLQPSYGHSLYMYNKACSL*KIDRNP 3
           +  VL +C+++   +GLRFF+WAG Q +Y HS ++Y+KAC L  I +NP
Sbjct: 61  VTEVLHKCSLNNSQIGLRFFVWAGYQSNYRHSSFLYSKACKLFNIKQNP 109


>ref|XP_004139002.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
           gi|449505643|ref|XP_004162530.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g47360-like [Cucumis sativus]
          Length = 475

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/101 (44%), Positives = 67/101 (66%)
 Frame = -2

Query: 305 SFYRYLSTTSIPFYTTKLTPSSADIYWTHLQKKSRNIEHTLNRIKVKLDPLCLISVLERC 126
           SF   +ST S  F+   L  SS+D+++ HL+K + N++ TL  +K KLD  C+  VL +C
Sbjct: 13  SFLLNISTLST-FHLNTL--SSSDLFYDHLEKSNGNLDKTLATLKTKLDSRCVNEVLYKC 69

Query: 125 AVDRPLLGLRFFIWAGLQPSYGHSLYMYNKACSL*KIDRNP 3
           + +   +GLRFFIWAG QP+Y HS +MY++AC L  I+ +P
Sbjct: 70  SFELSQMGLRFFIWAGRQPNYRHSSFMYSRACELIGINVSP 110