BLASTX nr result

ID: Bupleurum21_contig00038098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038098
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]    66   3e-09
emb|CBI16457.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...    65   6e-09

>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/109 (37%), Positives = 60/109 (55%)
 Frame = -3

Query: 412 VSIHGNDGGLVNCNYSNQSNPLIPFSSQPMLSLKIYHSELGSFNKSGEDQVVDFEEAENF 233
           VS+ G D G    +Y   +NPL PFS+QPM+S K+Y++  G+  +    +V ++ EAE  
Sbjct: 459 VSVRGVDQGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEYN 518

Query: 232 DMSRRSSPSSVIEDEETLTYSSNAAGHKELVTQQEIAHHEDDQIADEAS 86
            M  RSS  S +ED++ LT+ S A  H    T Q    H  +   DEA+
Sbjct: 519 CM--RSSDDSAVEDKQALTHFSEAVKH----TDQHAKEHXMENPYDEAA 561


>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/105 (35%), Positives = 60/105 (57%)
 Frame = -3

Query: 412 VSIHGNDGGLVNCNYSNQSNPLIPFSSQPMLSLKIYHSELGSFNKSGEDQVVDFEEAENF 233
           VS+ G D G    +Y   +NPL PFS+QPM+S K+Y++  G+  +    +V ++ EAE  
Sbjct: 423 VSVRGVDQGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEYN 482

Query: 232 DMSRRSSPSSVIEDEETLTYSSNAAGHKELVTQQEIAHHEDDQIA 98
            M  RSS  S +ED++ LT+ S A  H +   ++ +  +  D+ A
Sbjct: 483 CM--RSSDDSAVEDKQALTHFSEAVKHTDQHAKEHLMENPYDEAA 525


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1148

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/105 (35%), Positives = 60/105 (57%)
 Frame = -3

Query: 412 VSIHGNDGGLVNCNYSNQSNPLIPFSSQPMLSLKIYHSELGSFNKSGEDQVVDFEEAENF 233
           VS+ G D G    +Y   +NPL PFS+QPM+S K+Y++  G+  +    +V ++ EAE  
Sbjct: 459 VSVRGVDQGSSQSHYQELANPLGPFSTQPMVSKKLYNTVFGNSIQPQVGEVEEYGEAEYN 518

Query: 232 DMSRRSSPSSVIEDEETLTYSSNAAGHKELVTQQEIAHHEDDQIA 98
            M  RSS  S +ED++ LT+ S A  H +   ++ +  +  D+ A
Sbjct: 519 CM--RSSDDSAVEDKQALTHFSEAVKHTDQHAKEHLMENPYDEAA 561


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