BLASTX nr result

ID: Bupleurum21_contig00038092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038092
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002320066.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|XP_003517441.1| PREDICTED: putative DNA-binding protein ESCA...    62   4e-08
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...    62   5e-08
ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCA...    62   6e-08

>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
 Frame = +3

Query: 135 PLTAHNGHPLPSPFHSRD--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRERN 308
           P+TAH GH LP PFH+RD                                     KRER+
Sbjct: 3   PVTAH-GHSLPPPFHTRDFQLHHHQQQQQHQFHHQQQQNSEDEQSGSSSGLNKSLKRERD 61

Query: 309 DHNTS-NSIDGKELVSFTGSESEGNRKPRGRPAGSKNKPKP 428
           ++N S  + +GKEL++    E E  R+PRGRP+GSKNKPKP
Sbjct: 62  ENNNSMGNSEGKELITSGSGEGEITRRPRGRPSGSKNKPKP 102


>ref|XP_002320066.1| predicted protein [Populus trichocarpa] gi|222860839|gb|EEE98381.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
 Frame = +3

Query: 135 PLTAHNGHPLPSPFHSRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRERND- 311
           P++AH G PLP PFH+RD                                   KRE ++ 
Sbjct: 3   PVSAH-GRPLPPPFHTRDFHLHQFQHHQQQNSEDEQSGNGDLNRGQ-------KREHDEI 54

Query: 312 HNTSNSIDGKELV-SFTGSESEGNRKPRGRPAGSKNKPKP 428
           +N +N+++G ELV S +G E E +R+PRGRPAGSKNKPKP
Sbjct: 55  NNNNNTVEGLELVPSSSGGEGEISRRPRGRPAGSKNKPKP 94


>ref|XP_003517441.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 300

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 40/99 (40%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = +3

Query: 135 PLTAHNGHPLPSPFHS-RDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRERND 311
           P+TAH GH LP PFH+ RD                                   KRE  +
Sbjct: 3   PITAH-GHSLPPPFHAGRDLHLHQQQHQFHSLQEDEQSGSSGGLNLAH------KREHEE 55

Query: 312 HNTSNSIDGKELVSFTGSESEGNRKPRGRPAGSKNKPKP 428
           +N +NS DGKE       E+E +R+PRGRPAGSKNKPKP
Sbjct: 56  NNNNNSSDGKEGGGAGSGETEISRRPRGRPAGSKNKPKP 94


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
 Frame = +3

Query: 135 PLTAHNGHPLPSPFHSRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRERNDH 314
           P+TAH GH LP PFH+RD                                   KR+R+D+
Sbjct: 3   PVTAH-GHSLPPPFHTRD---LHLHHQQQHQFHPQQQNSEDEQSGSSGLNRGQKRDRDDN 58

Query: 315 --NTSNSIDGKELVSFTGSESEGNRKPRGRPAGSKNKPKP 428
             NT+   +G E+V  +G + E +R+PRGRPAGSKNKPKP
Sbjct: 59  NENTNGGSEGNEMVGLSG-DGEISRRPRGRPAGSKNKPKP 97


>ref|XP_002279636.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
           gi|147867329|emb|CAN81187.1| hypothetical protein
           VITISV_029906 [Vitis vinifera]
           gi|296089162|emb|CBI38865.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +3

Query: 135 PLTAHNGHPLPSPFHSRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRERNDH 314
           P+TAH G PLP PFH+RD                                   KR+R++ 
Sbjct: 3   PVTAH-GRPLPPPFHTRDLQLHHHHQYQHHPQANSEDEQSGSSSLNRAQ----KRDRDES 57

Query: 315 NTSNS---IDGKELVSFTGSESEGNRKPRGRPAGSKNKPKP 428
           N +N+   IDGKE  + +G + E  R+PRGRPAGSKNKPKP
Sbjct: 58  NATNNTSPIDGKEFGTSSG-DGEITRRPRGRPAGSKNKPKP 97


Top