BLASTX nr result

ID: Bupleurum21_contig00038085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038085
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70312.1| hypothetical protein VITISV_011858 [Vitis vinifera]    66   3e-09
emb|CAN77964.1| hypothetical protein VITISV_027327 [Vitis vinifera]    65   4e-09
emb|CAN81814.1| hypothetical protein VITISV_036990 [Vitis vinifera]    62   4e-08
emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]    62   6e-08
emb|CAN69448.1| hypothetical protein VITISV_007849 [Vitis vinifera]    62   6e-08

>emb|CAN70312.1| hypothetical protein VITISV_011858 [Vitis vinifera]
          Length = 438

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/128 (35%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
 Frame = -3

Query: 349 RDQNKRCLYHNDHGHNTEDCISLKYLLEDLKNQGHLNQFLPRITAPGPSTSQIEQXXXXX 170
           RD NKRC YH DHGH TE C SL Y++EDL   GHL Q++   TAP    S   Q     
Sbjct: 222 RDCNKRCAYHKDHGHTTETCRSLHYMVEDLLKAGHLKQYIR--TAPNGGESSHGQGPRAP 279

Query: 169 XXVLGG------------TTTPPRESAEREVLSIASILP-EQPIIFTDEDYEGVNPNHNE 29
              +              TT     S+ R  L+  SI P +  I+F   D   V   H +
Sbjct: 280 AAPIRAIINYIHGDPWMTTTVQEYISSIRPGLASGSIHPIDGTIVFPAMDPARVLHPHRD 339

Query: 28  ALVISVDV 5
           AL++++ V
Sbjct: 340 ALILTLGV 347


>emb|CAN77964.1| hypothetical protein VITISV_027327 [Vitis vinifera]
          Length = 854

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = -3

Query: 349 RDQNKRCLYHNDHGHNTEDCISLKYLLEDLKNQGHLNQFLPRITAPGPST 200
           RD NKRC YH DHGHNTE C SL Y++EDL   GHL Q++   TAP  +T
Sbjct: 397 RDSNKRCDYHKDHGHNTETCRSLHYMVEDLLKAGHLKQYVR--TAPNEAT 444


>emb|CAN81814.1| hypothetical protein VITISV_036990 [Vitis vinifera]
          Length = 528

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
 Frame = -3

Query: 349 RDQNKRCLYHNDHGHNTEDCISLKYLLEDLKNQGHLNQFLPRITAPGPSTSQIEQXXXXX 170
           RD+++RC +H DHGH TE C + +YL+E L   GHL Q+L R    G  TSQ        
Sbjct: 260 RDRSRRCTFHKDHGHTTETCRAFQYLVERLIKAGHLKQYL-RPDNEGRDTSQHHNPGPL- 317

Query: 169 XXVLGGTTTPPRESAEREVLSIASILP-----------------EQPIIFTDEDYEGVNP 41
                G   PPR    +++L  ASI                   +  IIF   D      
Sbjct: 318 -----GPQPPPRPRKRQKLLRAASIRERINSIRPRLMRGGPRPIDGTIIFPPVDPTRTLQ 372

Query: 40  NHNEALVISVDV 5
            H +AL++S+++
Sbjct: 373 PHRDALILSLEI 384


>emb|CAN69144.1| hypothetical protein VITISV_027771 [Vitis vinifera]
          Length = 635

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -3

Query: 349 RDQNKRCLYHNDHGHNTEDCISLKYLLEDLKNQGHLNQFL 230
           RD+NKRC YH DHGH TE C SL Y++EDL   GHL Q++
Sbjct: 348 RDRNKRCDYHKDHGHTTETCRSLHYMVEDLLKAGHLKQYI 387


>emb|CAN69448.1| hypothetical protein VITISV_007849 [Vitis vinifera]
          Length = 500

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
 Frame = -3

Query: 349 RDQNKRCLYHNDHGHNTEDCISLKYLLEDLKNQGHLNQFLPRITAPGPSTSQIEQXXXXX 170
           RD +KRC +H +HGH TE C SL+YL+E L   GHL Q++ R    G  TSQ        
Sbjct: 242 RDHSKRCAFHKEHGHTTEACRSLQYLVERLIKAGHLKQYI-RSDVGGKVTSQHHNPEAPR 300

Query: 169 XXVLGGTTTPPRESAEREVLSIASILP----------EQPIIFTDEDYEGVNPNHNEALV 20
              +  T      + ER    I SI P           + IIF   D       H +AL+
Sbjct: 301 APTVPKTLLRAASNRER----INSIRPGLTGGGPRPINETIIFPPVDPTRTLQPHRDALI 356

Query: 19  ISVDV 5
           +S+++
Sbjct: 357 LSLEI 361


Top