BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038077
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2...   258   4e-67
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...   235   2e-60
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...   235   2e-60
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              226   1e-57
ref|NP_196831.1| pentatricopeptide repeat-containing protein [Ar...   202   3e-50

>ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1|
            predicted protein [Populus trichocarpa]
          Length = 684

 Score =  258 bits (659), Expect = 4e-67
 Identities = 122/169 (72%), Positives = 140/169 (82%)
 Frame = +1

Query: 1    LLHLDPKDTAAYVLMFNMYVSSGLWKEAADVRRMMAERELRKEVGCSWITIKGEVHRFVV 180
            L  LDP+DTA Y+LMFN+Y S G WKEAA+VR+MMAER LRKE+ CSWIT+KG+VHRF+V
Sbjct: 508  LFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIV 567

Query: 181  GDKYHPQTEEIYSKLNELNIPRIKNELVILSEDDVCNNFPERKEQLLDHSERLAIAYGLI 360
            GDK+HPQTEEIYSKL  LN   IK E  +L+E+DV N+ PERKEQLL HSERLA+A+GLI
Sbjct: 568  GDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQLLVHSERLALAFGLI 627

Query: 361  SAPSDTAIVIFKNLRACKDCHDFAKHVSAITGREIVTRDSNRFHHFKTG 507
            S PS   +V+FKNLRACKDCHDF K VS ITGREIV RDS RFHHFK G
Sbjct: 628  STPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLG 676


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 753

 Score =  235 bits (600), Expect = 2e-60
 Identities = 108/169 (63%), Positives = 134/169 (79%)
 Frame = +1

Query: 1    LLHLDPKDTAAYVLMFNMYVSSGLWKEAADVRRMMAERELRKEVGCSWITIKGEVHRFVV 180
            +  LDP D+A YV+MFN+Y  +G W EAA  R+MMAER LRKEV CSWI +KG+VHRFVV
Sbjct: 577  IFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVV 636

Query: 181  GDKYHPQTEEIYSKLNELNIPRIKNELVILSEDDVCNNFPERKEQLLDHSERLAIAYGLI 360
            GD++HPQTE+IYSKL ELN+   K E  +L+E++   +F ERK+QLLDHSERLAIAYGLI
Sbjct: 637  GDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKDQLLDHSERLAIAYGLI 696

Query: 361  SAPSDTAIVIFKNLRACKDCHDFAKHVSAITGREIVTRDSNRFHHFKTG 507
               +DT I++FKN R+CKDCH+FAK VS +TGRE+V RD NRFHH  +G
Sbjct: 697  CTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSG 745


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 765

 Score =  235 bits (600), Expect = 2e-60
 Identities = 109/169 (64%), Positives = 134/169 (79%)
 Frame = +1

Query: 1    LLHLDPKDTAAYVLMFNMYVSSGLWKEAADVRRMMAERELRKEVGCSWITIKGEVHRFVV 180
            +  LDP D+A YV+MFN+Y  +G W EAA  R+MMAER LRKEV CSWI +KG+VHRFVV
Sbjct: 589  IFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVV 648

Query: 181  GDKYHPQTEEIYSKLNELNIPRIKNELVILSEDDVCNNFPERKEQLLDHSERLAIAYGLI 360
            GD++HPQTE+IYSKL ELN    K++  +L+E++   +F ERKEQLLDHSERLAIAYGLI
Sbjct: 649  GDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENALCDFTERKEQLLDHSERLAIAYGLI 708

Query: 361  SAPSDTAIVIFKNLRACKDCHDFAKHVSAITGREIVTRDSNRFHHFKTG 507
               +DT I++FKN R+CKDCHDFAK VS +TGRE+V RD NRFHH  +G
Sbjct: 709  CTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSG 757


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  226 bits (576), Expect = 1e-57
 Identities = 106/170 (62%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
 Frame = +1

Query: 1    LLHLDPKDTAAYVLMFNMYVSSGLWKEAADVRRMMAERELRKEVGCSWITIKGEVHRFVV 180
            L  LDP DTA Y+L+FN+Y + G W+EA  VR++MAEREL+KEV CSWI++KG+VHRFVV
Sbjct: 585  LFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVV 644

Query: 181  GDKYHPQTEEIYSKLNELNIPRIKNELVILS-EDDVCNNFPERKEQLLDHSERLAIAYGL 357
            GD++HPQTE IYSKL E     I + + +L+ EDDV  +   RKEQLLDHSE+LAIA+GL
Sbjct: 645  GDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGL 704

Query: 358  ISAPSDTAIVIFKNLRACKDCHDFAKHVSAITGREIVTRDSNRFHHFKTG 507
            IS   +  I++FKNLRAC+DCH+F K VS +TGR+IV RDS RFHHFK+G
Sbjct: 705  ISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSG 754


>ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g13270, chloroplastic; Flags: Precursor
            gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
            thaliana] gi|332004490|gb|AED91873.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  202 bits (513), Expect = 3e-50
 Identities = 100/171 (58%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
 Frame = +1

Query: 1    LLHLDPKDTAAYVLMFNMYVSSGLWKEAADVRRMMAERELRKEVGCSWITIKGEVHRFVV 180
            L  LDP+DTA YVL FN+Y  +G W+EAA++ ++M ER L+KE+ CSWI  KG++HRF+V
Sbjct: 582  LRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIV 641

Query: 181  GDKYHPQTEEIYSKLNELNIPRIKNELVILSEDDVCNNFPERKEQLLDHSERLAIAYGLI 360
            GDK+HPQT+EIY KL E +          +  D    N  ER+EQLLDHSERLAIA+GLI
Sbjct: 642  GDKHHPQTQEIYEKLKEFD--------GFMEGDMFQCNMTERREQLLDHSERLAIAFGLI 693

Query: 361  SAPSD--TAIVIFKNLRACKDCHDFAKHVSAITGREIVTRDSNRFHHFKTG 507
            S   +    I +FKNLRAC DCH+FAKHVS +TG EIV RDS RFHHFK G
Sbjct: 694  SVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEG 744