BLASTX nr result

ID: Bupleurum21_contig00038074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038074
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase S...    95   5e-18
emb|CBI32522.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN72113.1| hypothetical protein VITISV_009996 [Vitis vinifera]    95   5e-18
ref|XP_002519127.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_003539032.1| PREDICTED: serine/threonine-protein kinase S...    70   2e-10

>ref|XP_002281272.2| PREDICTED: serine/threonine-protein kinase SMG1 [Vitis vinifera]
          Length = 3787

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -2

Query: 295 NIVNILGQLTAVNFLNKCSARRQ-KDCPGRGLEIEKVLPENSLRDRHVMIIFEHLEKYSV 119
           N++  L QLTAV F +KCS R+Q        +   +VL  N  RD H +++ EHL KYS+
Sbjct: 554 NVIRTLDQLTAVEFSSKCSLRKQISKNDSVDIATGEVLDRNDFRDGHSILVIEHLRKYSM 613

Query: 118 LLVNALHLSSPLVVKLEAVQWIQKFCESVIGEYE 17
           LLV ALH+S+PL VK+ A++WIQ+FCE VI  YE
Sbjct: 614 LLVQALHVSTPLSVKVVALEWIQRFCEGVIATYE 647


>emb|CBI32522.3| unnamed protein product [Vitis vinifera]
          Length = 3305

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -2

Query: 295 NIVNILGQLTAVNFLNKCSARRQ-KDCPGRGLEIEKVLPENSLRDRHVMIIFEHLEKYSV 119
           N++  L QLTAV F +KCS R+Q        +   +VL  N  RD H +++ EHL KYS+
Sbjct: 446 NVIRTLDQLTAVEFSSKCSLRKQISKNDSVDIATGEVLDRNDFRDGHSILVIEHLRKYSM 505

Query: 118 LLVNALHLSSPLVVKLEAVQWIQKFCESVIGEYE 17
           LLV ALH+S+PL VK+ A++WIQ+FCE VI  YE
Sbjct: 506 LLVQALHVSTPLSVKVVALEWIQRFCEGVIATYE 539


>emb|CAN72113.1| hypothetical protein VITISV_009996 [Vitis vinifera]
          Length = 1844

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -2

Query: 295 NIVNILGQLTAVNFLNKCSARRQ-KDCPGRGLEIEKVLPENSLRDRHVMIIFEHLEKYSV 119
           N++  L QLTAV F +KCS R+Q        +   +VL  N  RD H +++ EHL KYS+
Sbjct: 554 NVIRTLDQLTAVEFSSKCSLRKQISKNDSVDIATGEVLDRNDFRDGHSILVIEHLRKYSM 613

Query: 118 LLVNALHLSSPLVVKLEAVQWIQKFCESVIGEYE 17
           LLV ALH+S+PL VK+ A++WIQ+FCE VI  YE
Sbjct: 614 LLVQALHVSTPLSVKVVALEWIQRFCEGVIATYE 647


>ref|XP_002519127.1| conserved hypothetical protein [Ricinus communis]
           gi|223541790|gb|EEF43338.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 3804

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
 Frame = -2

Query: 295 NIVNILGQLTAVNFLNKCSARRQKDCPGR-GLEIEKVLPENSLRDRHVMIIFEHLEKYSV 119
           N++  + +LTAV FL+KC  + Q        + +EK     S  D +   I EHL KYS+
Sbjct: 584 NVLKTMDRLTAVEFLSKCCIKNQTSKNASVDVAVEKA-HNTSFGDVYSTDIVEHLRKYSL 642

Query: 118 LLVNALHLSSPLVVKLEAVQWIQKFCESVIGEYE 17
            LV ALH+ SPL VKL A++WIQKF E +I  YE
Sbjct: 643 FLVKALHVHSPLAVKLAALEWIQKFAEDLIASYE 676


>ref|XP_003539032.1| PREDICTED: serine/threonine-protein kinase SMG1 [Glycine max]
          Length = 3720

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = -2

Query: 292 IVNILGQLTAVNFLNKCSARRQKDCPGRGLEIEKVLPENS--LRDRHVMIIFEHLEKYSV 119
           +V  L +L +V FL KCS R Q +C    +E      ++     +  + +I EHLEKYS 
Sbjct: 527 VVKALERLNSVEFLIKCSDREQ-NCNKAFVEFPTKTEDSDDQFSNGFLAVITEHLEKYSK 585

Query: 118 LLVNALHLSSPLVVKLEAVQWIQKFCESVI 29
           LL+ A H+SSPL +KL A+ W QKFCE+V+
Sbjct: 586 LLIKAFHVSSPLAIKLVALDWGQKFCENVM 615


Top