BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038071
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]          81   1e-13
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    76   2e-12
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    75   4e-12
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                72   4e-11
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    72   4e-11

>gb|AFJ66197.1| hypothetical protein 7G9.16 [Boechera stricta]
          Length = 671

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 16/109 (14%)
 Frame = +1

Query: 52  YNPSHCPC**FQTLIAPVSDMEIYNTLKAMKNGKCPGPDGFQAEFFITTCCIIGTKMI-- 225
           Y    CP    Q L+A VS  EI +TL +M   K  GPDGF  EFF  +  IIG + +  
Sbjct: 394 YIDFRCPENLAQQLVARVSPEEIKHTLFSMPKNKSSGPDGFTPEFFQASWAIIGPEFVIA 453

Query: 226 --------------NAAAIALVPKIVCPSSMSDYRPISCCNTIYKCISK 330
                         NA  + L+PK+  P++++DYRPI+CCN IYK ISK
Sbjct: 454 FQSYFLHGFMPRGVNATTLTLIPKVEGPTTLTDYRPIACCNVIYKVISK 502


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/98 (44%), Positives = 53/98 (54%), Gaps = 16/98 (16%)
 Frame = +1

Query: 85  QTLIAPVSDMEIYNTLKAMKNGKCPGPDGFQAEFFITTCCIIGT---------------- 216
           Q+LI PV+  EI   L  M + K PGPDG+ +EFF  T  IIG                 
Sbjct: 447 QSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLP 506

Query: 217 KMINAAAIALVPKIVCPSSMSDYRPISCCNTIYKCISK 330
           K IN+  +AL+PK      M DYRPISCCN +YK ISK
Sbjct: 507 KGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISK 544


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/107 (42%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
 Frame = +1

Query: 58   PSHCPC**FQTLIAPVSDMEIYNTLKAMKNGKCPGPDGFQAEFFITTCCIIGT------- 216
            P HC       L A VS  EI   L +M N K PGPDG+ +EF+     IIG        
Sbjct: 853  PYHCSPAEKDMLTASVSAKEIRGALFSMPNDKSPGPDGYTSEFYKRAWDIIGAEFVLAVK 912

Query: 217  ---------KMINAAAIALVPKIVCPSSMSDYRPISCCNTIYKCISK 330
                     K +N   +AL+PK +    M DYRPISCCN IYK ISK
Sbjct: 913  SFFEKGFLPKGVNTTILALIPKKLEAKEMKDYRPISCCNVIYKVISK 959


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/98 (41%), Positives = 51/98 (52%), Gaps = 16/98 (16%)
 Frame = +1

Query: 85  QTLIAPVSDMEIYNTLKAMKNGKCPGPDGFQAEFFITTCCIIGT---------------- 216
           + L   VS  EI   L +M   K PGPDG+ +EF+  T  IIG                 
Sbjct: 94  EMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLP 153

Query: 217 KMINAAAIALVPKIVCPSSMSDYRPISCCNTIYKCISK 330
           K IN+  +AL+PK +    M DYRPISCCN +YK ISK
Sbjct: 154 KGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISK 191


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/98 (43%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
 Frame = +1

Query: 85   QTLIAPVSDMEIYNTLKAMKNGKCPGPDGFQAEFFITTCCIIGT---------------- 216
            + L   V+  EI   L +M N K PGPDGF +EFF  T  I+G                 
Sbjct: 855  ELLTRVVTAEEIKKVLFSMPNDKSPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGFLP 914

Query: 217  KMINAAAIALVPKIVCPSSMSDYRPISCCNTIYKCISK 330
            K IN   +AL+PK      M DYRPISCCN IYK ISK
Sbjct: 915  KGINTTILALIPKKKEAKEMKDYRPISCCNVIYKVISK 952