BLASTX nr result

ID: Bupleurum21_contig00038070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038070
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vi...   108   3e-22
ref|XP_002523326.1| Auxin response factor, putative [Ricinus com...   102   3e-20
ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin respon...   100   2e-19
ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cu...   100   2e-19
emb|CBI40565.3| unnamed protein product [Vitis vinifera]               96   4e-18

>ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 764

 Score =  108 bits (271), Expect = 3e-22
 Identities = 61/130 (46%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
 Frame = +2

Query: 5   DTGTGCRLFGIDLRNSNISSPAKEVKDSLTAANNGKQASSVAHLEANKAEVLDLNEVCGK 184
           +   GCRLFGIDL N++ ++   E+      +++ K   S    EA++ + LD+++   +
Sbjct: 566 EASIGCRLFGIDLTNNSKATALLEMSCPSITSSSVKGPISAVVSEADRIQNLDVSKSSNE 625

Query: 185 ---VELEAKEKETHNKHSSSASKRTRTKVHMQGIAVGRAVDLTLVEGYDDLIIEMEKMFE 355
              V  EA +KET  + S + S RTRTKV MQG+AVGRAVDLT +EGYD+LI E+EKMFE
Sbjct: 626 QKQVVPEASQKETQGRQSCTPSSRTRTKVQMQGVAVGRAVDLTALEGYDELISELEKMFE 685

Query: 356 ITGELRQRKK 385
           I GEL  R K
Sbjct: 686 IKGELCPRNK 695


>ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
           gi|223537414|gb|EEF39042.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 667

 Score =  102 bits (254), Expect = 3e-20
 Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 4/131 (3%)
 Frame = +2

Query: 5   DTGTGCRLFGIDL-RNSNISSPAKEVKDSLTAANNGKQASSVAHLEANKAEVLDLNEVCG 181
           +   GCRLFGIDL  NS+ ++P ++    L   +NG + S+ A    ++A+ +D+++   
Sbjct: 469 ENSVGCRLFGIDLISNSSTAAPPEKESLGLKMDSNGPRGSAPAVDGTDEAQNVDVSKASK 528

Query: 182 KVELEAKE---KETHNKHSSSASKRTRTKVHMQGIAVGRAVDLTLVEGYDDLIIEMEKMF 352
           + +  A E   KETH+K  ++ S RTRTKV MQG+AVGRAVDLT ++GY DLI E+E++F
Sbjct: 529 EQKEAASEVMPKETHSKPGTT-STRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELF 587

Query: 353 EITGELRQRKK 385
           EI GEL  R+K
Sbjct: 588 EIKGELSTREK 598


>ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 590

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/126 (46%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
 Frame = +2

Query: 5   DTGTGCRLFGIDLRNSNISSPAKEVKDS-LTAANNGKQASSVAHLEANKAEVLDLNEVCG 181
           D   GCR+FGIDL+N+    P  E + S L    +G +   V  +   + +  +L++   
Sbjct: 397 DISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSK 456

Query: 182 KVEL--EAKEKETHNKHSSSASKRTRTKVHMQGIAVGRAVDLTLVEGYDDLIIEMEKMFE 355
           + +L  E   K T  KH S+ S RTRTKV MQG+AVGRAVDLT +EGY+DLI E+E +FE
Sbjct: 457 EQQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFE 516

Query: 356 ITGELR 373
           I GELR
Sbjct: 517 IKGELR 522


>ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 693

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/126 (46%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
 Frame = +2

Query: 5   DTGTGCRLFGIDLRNSNISSPAKEVKDS-LTAANNGKQASSVAHLEANKAEVLDLNEVCG 181
           D   GCR+FGIDL+N+    P  E + S L    +G +   V  +   + +  +L++   
Sbjct: 500 DISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTDGAKEPVVTAVVTPQVDAGNLSQPSK 559

Query: 182 KVEL--EAKEKETHNKHSSSASKRTRTKVHMQGIAVGRAVDLTLVEGYDDLIIEMEKMFE 355
           + +L  E   K T  KH S+ S RTRTKV MQG+AVGRAVDLT +EGY+DLI E+E +FE
Sbjct: 560 EQQLSTELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFE 619

Query: 356 ITGELR 373
           I GELR
Sbjct: 620 IKGELR 625


>emb|CBI40565.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 56/128 (43%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
 Frame = +2

Query: 5   DTGTGCRLFGIDLRNSNISSPAKEVKDSLTAANNGKQASSVAHLEANKAEVLDLNEVCGK 184
           ++  GCRLFGIDL N++ ++   E+  +L  + +  +   V                   
Sbjct: 431 NSSIGCRLFGIDLTNNSKATALLEMIQNLDVSKSSNEQKQVVP----------------- 473

Query: 185 VELEAKEKETHNKHSSSASKRTRTK-VHMQGIAVGRAVDLTLVEGYDDLIIEMEKMFEIT 361
              EA +KET  + S + S RTRTK V MQG+AVGRAVDLT +EGYD+LI E+EKMFEI 
Sbjct: 474 ---EASQKETQGRQSCTPSSRTRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIK 530

Query: 362 GELRQRKK 385
           GEL  R K
Sbjct: 531 GELCPRNK 538


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