BLASTX nr result

ID: Bupleurum21_contig00038060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038060
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519951.1| DNA binding protein, putative [Ricinus commu...   169   2e-40
ref|XP_002265123.1| PREDICTED: PHD finger protein At1g33420-like...   169   3e-40
ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit...   167   1e-39
ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like...   166   2e-39
ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39

>ref|XP_002519951.1| DNA binding protein, putative [Ricinus communis]
           gi|223540997|gb|EEF42555.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 705

 Score =  169 bits (429), Expect = 2e-40
 Identities = 81/151 (53%), Positives = 109/151 (72%)
 Frame = -3

Query: 458 GSSDFSGRDILNFWDRLCQTLAVRKISVMDVSRKYGLEYRLLHAVSYGRAWYGKWGYEFG 279
           GS   +G  I++FWDRLC TL VRK+SVMDVSRKYG+EYRLL A++ G +WYG WGYEFG
Sbjct: 201 GSDILTGYHIMDFWDRLCATLRVRKVSVMDVSRKYGIEYRLLCAITKGHSWYGDWGYEFG 260

Query: 278 TGSYGTTLNAYNSAIACLSSTSLSHFTCQGRRPRTLLQEIIAFYLSISDVELKTLRDLFS 99
            GSY  T ++YN A+  +S+  L+    Q RRPRT LQ +IAFY S+SD+E+ TL+DL S
Sbjct: 261 RGSYALTSDSYNEAVKTISNVPLAPILFQRRRPRTHLQAVIAFYQSLSDLEVLTLKDLCS 320

Query: 98  FILSLIHNSHSTLRIKREEQKLEFNSTEALC 6
           F+L LIH ++ +L  K   +K+  +++  LC
Sbjct: 321 FMLRLIHQTNESLLPKATLKKIRSSTSNVLC 351


>ref|XP_002265123.1| PREDICTED: PHD finger protein At1g33420-like [Vitis vinifera]
          Length = 739

 Score =  169 bits (427), Expect = 3e-40
 Identities = 84/151 (55%), Positives = 107/151 (70%)
 Frame = -3

Query: 458 GSSDFSGRDILNFWDRLCQTLAVRKISVMDVSRKYGLEYRLLHAVSYGRAWYGKWGYEFG 279
           G+   SG DI+NFWDRLC+ LAVRK+SVMD+S+KYG EYRLLH V+ G+ WYG WGY+FG
Sbjct: 201 GADILSGFDIMNFWDRLCKRLAVRKVSVMDLSKKYGTEYRLLHTVAKGQVWYGHWGYQFG 260

Query: 278 TGSYGTTLNAYNSAIACLSSTSLSHFTCQGRRPRTLLQEIIAFYLSISDVELKTLRDLFS 99
           TGSY  T +AY +AI  LS+  LS F  QGR PRT LQ +IAFY S+++ EL+TL+DLFS
Sbjct: 261 TGSYALTSDAYQNAIHTLSNIPLSTFFFQGRGPRTHLQTLIAFYQSLAETELRTLKDLFS 320

Query: 98  FILSLIHNSHSTLRIKREEQKLEFNSTEALC 6
           F+L+ I    S L   + E +   +    LC
Sbjct: 321 FLLNRI----SELNTAKSEDQTSSHYQNLLC 347


>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
           gi|296084820|emb|CBI27702.3| unnamed protein product
           [Vitis vinifera]
          Length = 692

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/138 (55%), Positives = 105/138 (76%)
 Frame = -3

Query: 458 GSSDFSGRDILNFWDRLCQTLAVRKISVMDVSRKYGLEYRLLHAVSYGRAWYGKWGYEFG 279
           GS   SG  I++FWDRLC+ L VRK+SVMDVS+K+GLE+RLLHA++ G  WYG+WGYEFG
Sbjct: 199 GSRILSGCHIMDFWDRLCKNLGVRKVSVMDVSKKHGLEFRLLHAITKGHPWYGEWGYEFG 258

Query: 278 TGSYGTTLNAYNSAIACLSSTSLSHFTCQGRRPRTLLQEIIAFYLSISDVELKTLRDLFS 99
            GS+  TL+AY +A+  LS+  LS F  QGR+PRT LQ++I++Y S+S+ EL   RDLF 
Sbjct: 259 AGSFALTLDAYKAAVETLSTLPLSIFVSQGRKPRTHLQDLISYYQSLSERELVHARDLFW 318

Query: 98  FILSLIHNSHSTLRIKRE 45
           F++SLIH++H +   K +
Sbjct: 319 FLMSLIHDAHKSSPTKND 336


>ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
          Length = 668

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/145 (55%), Positives = 106/145 (73%), Gaps = 4/145 (2%)
 Frame = -3

Query: 458 GSSDFSGRDILNFWDRLCQTLAVRKISVMDVSRKYGLEYRLLHAVSYGRAWYGKWGYEFG 279
           GS   SG  I++FWDR C+ L VRK+SVMDVS+KYG+EYRLLHA++ G  WYG+WGYEFG
Sbjct: 177 GSKHLSGCHIMDFWDRFCKMLGVRKVSVMDVSKKYGVEYRLLHAITKGHPWYGEWGYEFG 236

Query: 278 TGSYGTTLNAYNSAIACLSSTSLSHFTCQGRRPRTLLQEIIAFYLSISDVELKTLRDLFS 99
            GS+  T +AY  A+  LSS  LS FT QGR+PR+ LQ+II +Y S+S+ +L  +RDLF 
Sbjct: 237 AGSFAVTPDAYKMAVETLSSLPLSIFTSQGRKPRSHLQDIILYYQSLSERKLVNVRDLFK 296

Query: 98  FILSLIHN----SHSTLRIKREEQK 36
           F++SLIHN    S +T  I  E+Q+
Sbjct: 297 FLMSLIHNVRKSSSTTNDIMDEKQQ 321


>ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|222862167|gb|EEE99673.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/132 (59%), Positives = 101/132 (76%)
 Frame = -3

Query: 458 GSSDFSGRDILNFWDRLCQTLAVRKISVMDVSRKYGLEYRLLHAVSYGRAWYGKWGYEFG 279
           GS   SG  I++FWDRLC+TL VRK+SVMDVS+KYGLEYRLLHA++ G +WYG WGYEFG
Sbjct: 211 GSRVLSGVHIMDFWDRLCKTLGVRKVSVMDVSKKYGLEYRLLHAITKGHSWYGDWGYEFG 270

Query: 278 TGSYGTTLNAYNSAIACLSSTSLSHFTCQGRRPRTLLQEIIAFYLSISDVELKTLRDLFS 99
            GS+G T+ AY SA+  LSS  LS F  +G++ +T L +II FY S+SD EL  +RDLF 
Sbjct: 271 AGSFGLTVYAYKSAVETLSSLPLSIFLSEGQKLQTRLLDIIKFYQSLSDRELVNIRDLFC 330

Query: 98  FILSLIHNSHST 63
           ++ SLIH++H +
Sbjct: 331 YLTSLIHDAHKS 342


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