BLASTX nr result

ID: Bupleurum21_contig00038032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038032
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   152   4e-35
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   151   6e-35
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]   147   9e-34
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]   147   9e-34
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]   145   4e-33

>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  152 bits (383), Expect = 4e-35
 Identities = 68/105 (64%), Positives = 87/105 (82%)
 Frame = -3

Query: 316  DSDYALDINDRRSISGYVFMLSGAAISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKG 137
            DSDYA D++DR+S SGYVF+LS   +SWSS+KQ +VTLS+TEAE+VAA SCAC  VW++ 
Sbjct: 887  DSDYAGDVDDRKSTSGYVFLLSEGVVSWSSKKQPVVTLSTTEAEFVAAASCACQGVWMRR 946

Query: 136  ILDQISFKQSKCLEILCDNSSTIKLLKNPVMHRRTKHIDVRYHYL 2
            +L+++   Q KC  +LCDNSSTIKL KNPVMH R+KHIDVR+H+L
Sbjct: 947  VLEKLCHSQGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVRFHFL 991



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/80 (41%), Positives = 43/80 (53%)
 Frame = -3

Query: 241  ISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKGILDQISFKQSKCLEILCDNSSTIKL 62
            ISW S+KQ  V  SSTEAEY A        +WL+ +L  +    S    + CDN S I +
Sbjct: 2282 ISWRSKKQTFVARSSTEAEYRALADTTSELLWLRWLLKDLGVSTSSATPLYCDNQSAIHI 2341

Query: 61   LKNPVMHRRTKHIDVRYHYL 2
              N V H RTKHI +  H++
Sbjct: 2342 AHNDVFHERTKHIKIDCHFI 2361


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  151 bits (381), Expect = 6e-35
 Identities = 67/105 (63%), Positives = 87/105 (82%)
 Frame = -3

Query: 316  DSDYALDINDRRSISGYVFMLSGAAISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKG 137
            DSDYA D++ +RS SG+VFMLSG A+SWSS+KQ +VTLS+TEAEYVAA  CAC  VW++ 
Sbjct: 1034 DSDYAGDMDGKRSTSGFVFMLSGGAVSWSSRKQHVVTLSTTEAEYVAAAGCACQSVWMRR 1093

Query: 136  ILDQISFKQSKCLEILCDNSSTIKLLKNPVMHRRTKHIDVRYHYL 2
            +L+++ + Q KC+ + CDNSSTIKL KNPV H R+KHIDVR+H+L
Sbjct: 1094 VLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHIDVRFHFL 1138


>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
          Length = 1770

 Score =  147 bits (371), Expect = 9e-34
 Identities = 67/105 (63%), Positives = 84/105 (80%)
 Frame = -3

Query: 316 DSDYALDINDRRSISGYVFMLSGAAISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKG 137
           DSDY  D+ DR+S SGYVFMLS  A+SW S+KQ IV+LS+TEAE++AATSCAC  +W++ 
Sbjct: 155 DSDYPGDLEDRKSTSGYVFMLSSEAVSWYSRKQPIVSLSTTEAEFIAATSCACQAIWIRR 214

Query: 136 ILDQISFKQSKCLEILCDNSSTIKLLKNPVMHRRTKHIDVRYHYL 2
           ILD++S  QS C  + CDNSSTIKL KNPVM  R+KHIDV +H+L
Sbjct: 215 ILDKLSHTQSNCTTVFCDNSSTIKLSKNPVMDGRSKHIDVHFHFL 259



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/101 (32%), Positives = 61/101 (60%)
 Frame = -3

Query: 304  ALDINDRRSISGYVFMLSGAAISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKGILDQ 125
            A ++ DR S  G  F +S   ++W S+KQ++V+ S  EA+Y+   SC  H +W+K +   
Sbjct: 1617 AKNVEDRXSTLGACFFVSDYLVAWLSKKQNLVSFSIMEAKYIVVGSCYTHLIWMKKMFSD 1676

Query: 124  ISFKQSKCLEILCDNSSTIKLLKNPVMHRRTKHIDVRYHYL 2
               +Q   + ++CDN + I + KN   H +TK+I++++H++
Sbjct: 1677 YDIEQD-TMNVMCDNMTAINISKNLFFHSQTKYIEIQHHFI 1716


>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
          Length = 1226

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/105 (64%), Positives = 86/105 (81%)
 Frame = -3

Query: 316  DSDYALDINDRRSISGYVFMLSGAAISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKG 137
            DSDYA+D+ DR+S SGYVF+LS  AISWSS+KQ +V+LS+TEAE++AATSCAC  VWLK 
Sbjct: 1073 DSDYAVDLEDRKSTSGYVFLLSSEAISWSSKKQPVVSLSTTEAEFIAATSCACQAVWLKR 1132

Query: 136  ILDQISFKQSKCLEILCDNSSTIKLLKNPVMHRRTKHIDVRYHYL 2
            +L ++   QS+   I CD+SS IKLLKNPVMH R+KHIDV +H+L
Sbjct: 1133 VLGKLDQNQSRSCVIQCDSSSAIKLLKNPVMHGRSKHIDVXFHFL 1177


>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
          Length = 1021

 Score =  145 bits (365), Expect = 4e-33
 Identities = 67/105 (63%), Positives = 84/105 (80%)
 Frame = -3

Query: 316  DSDYALDINDRRSISGYVFMLSGAAISWSSQKQDIVTLSSTEAEYVAATSCACHCVWLKG 137
            DSDYA D+ D++S SGYVF+LS  A+SWSS+KQ +V+LS+TEAE++AA SCAC  VWLK 
Sbjct: 873  DSDYAGDLEDKKSTSGYVFLLSSRAVSWSSRKQPVVSLSTTEAEFIAAASCACQAVWLKR 932

Query: 136  ILDQISFKQSKCLEILCDNSSTIKLLKNPVMHRRTKHIDVRYHYL 2
            +L ++S  Q K   I CDNSS IKL KNPVMH R+KHIDVR+H+L
Sbjct: 933  VLGKLSQNQGKSTTIHCDNSSAIKLSKNPVMHGRSKHIDVRFHFL 977


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