BLASTX nr result

ID: Bupleurum21_contig00038023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038023
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525114.1| PREDICTED: protein MKS1-like [Glycine max]        104   7e-21
ref|XP_003532861.1| PREDICTED: protein MKS1-like [Glycine max]        100   9e-20
gb|AFK43245.1| unknown [Medicago truncatula]                           99   4e-19
ref|XP_003630243.1| Protein MKS1 [Medicago truncatula] gi|355524...    99   4e-19
ref|XP_003523237.1| PREDICTED: protein MKS1-like [Glycine max]         97   1e-18

>ref|XP_003525114.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 208

 Score =  104 bits (260), Expect = 7e-21
 Identities = 61/110 (55%), Positives = 69/110 (62%), Gaps = 9/110 (8%)
 Frame = -3

Query: 339 PSPIRRQLQGPRPSPLRVHKDSHTIKKPPLAPA---------PEIRQPVIIYDISPKVIH 187
           P     QLQG RP PLRV KDSH I+KPPL P          PE R+PVIIY +SPKV+H
Sbjct: 17  PGKKELQLQGTRPPPLRVSKDSHKIRKPPLPPTAHQPAPPPPPEQRKPVIIYTVSPKVLH 76

Query: 186 ATVNDFRSVVQRLXXXXXXXXXXXXXXXXGNISPAARLASIERTSPPERE 37
            TV+DF +VVQRL                G++SPAARLASIERTSP ERE
Sbjct: 77  VTVSDFMNVVQRL---TGPSSGAEPNLRAGDVSPAARLASIERTSPSERE 123


>ref|XP_003532861.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 198

 Score =  100 bits (250), Expect = 9e-20
 Identities = 59/108 (54%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
 Frame = -3

Query: 339 PSPIRRQLQGPRPSPLRVHKDSHTIKKPPLAPA-------PEIRQPVIIYDISPKVIHAT 181
           P     QLQG RP PLRV KDSH I+KPPL P        PE R+PVIIY +SPKV+H  
Sbjct: 17  PGKKELQLQGTRPPPLRVSKDSHKIRKPPLPPTAHQPAALPEHRKPVIIYAVSPKVLHVP 76

Query: 180 VNDFRSVVQRLXXXXXXXXXXXXXXXXGNISPAARLASIERTSPPERE 37
             DF +VVQRL                G++SPAARLASIERTSP ERE
Sbjct: 77  AGDFMNVVQRL-----------TGPSSGDVSPAARLASIERTSPSERE 113


>gb|AFK43245.1| unknown [Medicago truncatula]
          Length = 214

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 64/134 (47%), Positives = 74/134 (55%), Gaps = 23/134 (17%)
 Frame = -3

Query: 339 PSPIRR-QLQGPRPSPLRVHKDSHTIKKPPLAPAP----------EIRQPVIIYDISPKV 193
           PSP R  Q+QG RP PLRV K+S TI+KPPL PA           + RQP+IIY +SPKV
Sbjct: 15  PSPRRELQIQGTRPPPLRVSKESRTIRKPPLPPAAAHHHQPAGASQHRQPLIIYSVSPKV 74

Query: 192 IHATVNDFRSVVQRLXXXXXXXXXXXXXXXXGNISPAARLASIERTSPPERE-------- 37
           +H  V+DF  VVQRL                  +SPAARLASIERTSP ERE        
Sbjct: 75  LHIPVSDFMDVVQRLTGPSAGEEAPQQSGA---VSPAARLASIERTSPTERERIQQTVDE 131

Query: 36  ----ISSGVHMGGF 7
               +  GV MG F
Sbjct: 132 DLTWLLEGVEMGQF 145


>ref|XP_003630243.1| Protein MKS1 [Medicago truncatula] gi|355524265|gb|AET04719.1|
           Protein MKS1 [Medicago truncatula]
          Length = 226

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 64/134 (47%), Positives = 74/134 (55%), Gaps = 23/134 (17%)
 Frame = -3

Query: 339 PSPIRR-QLQGPRPSPLRVHKDSHTIKKPPLAPAP----------EIRQPVIIYDISPKV 193
           PSP R  Q+QG RP PLRV K+S TI+KPPL PA           + RQP+IIY +SPKV
Sbjct: 15  PSPRRELQIQGTRPPPLRVSKESRTIRKPPLPPAAAHHHQPAGASQHRQPLIIYSVSPKV 74

Query: 192 IHATVNDFRSVVQRLXXXXXXXXXXXXXXXXGNISPAARLASIERTSPPERE-------- 37
           +H  V+DF  VVQRL                  +SPAARLASIERTSP ERE        
Sbjct: 75  LHIPVSDFMDVVQRLTGPSAGEEAPQQSGA---VSPAARLASIERTSPTERERIQQTVDE 131

Query: 36  ----ISSGVHMGGF 7
               +  GV MG F
Sbjct: 132 DLTWLLEGVEMGQF 145


>ref|XP_003523237.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 212

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 60/109 (55%), Positives = 66/109 (60%), Gaps = 14/109 (12%)
 Frame = -3

Query: 321 QLQGPRPSPLRVHKDSHTIKKPPLAPA----------PE----IRQPVIIYDISPKVIHA 184
           QLQGPRP PL+V KDSH IKKPP  PA          PE     R+PVIIY +SPKVIH 
Sbjct: 19  QLQGPRPPPLKVSKDSHKIKKPPPHPAHHHHNHPHAPPEQNLQQREPVIIYSVSPKVIHV 78

Query: 183 TVNDFRSVVQRLXXXXXXXXXXXXXXXXGNISPAARLASIERTSPPERE 37
           T  DF  VVQRL                G++SPAARLASIE+TSP ERE
Sbjct: 79  TPGDFMDVVQRL---TGASSGEYPPAGRGDVSPAARLASIEKTSPSERE 124


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