BLASTX nr result

ID: Bupleurum21_contig00038005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00038005
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329002.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002301646.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002514856.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_002325902.1| predicted protein [Populus trichocarpa] gi|1...    61   8e-08
ref|XP_003621682.1| hypothetical protein MTR_7g021660 [Medicago ...    60   2e-07

>ref|XP_002329002.1| predicted protein [Populus trichocarpa] gi|222839236|gb|EEE77587.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/81 (40%), Positives = 49/81 (60%)
 Frame = -1

Query: 257 MRDIVKRFVVFPFSMGCVSQSCTQVGSVHPRKSSKSGSDSDVITRRQEGEEERPSEIKMK 78
           MRD ++R V+ PFS GCVS+S   +G VH  + +K+ ++      ++E EE   S   MK
Sbjct: 1   MRDRMERLVLLPFSFGCVSESSVAIG-VHQPRRAKTDTNLSATRTKEEDEESSSSAESMK 59

Query: 77  NSWVFFSFHKPNIAFGIHKLI 15
            S  F +  KPNI+ G+H+LI
Sbjct: 60  TSLKFLALSKPNISTGLHRLI 80


>ref|XP_002301646.1| predicted protein [Populus trichocarpa] gi|222843372|gb|EEE80919.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 257 MRDIVKRFVVFPFSMGCVSQSCTQVGSV-HPRKSSKSGSDSDVITRRQEGEEERPSEIKM 81
           MRD  +RFVV PFS+GC SQS   V +   P K  K  + S   TRR+EGEE    E   
Sbjct: 1   MRDRKERFVVLPFSIGCASQSSVAVATAAEPCKKPKHETKSSHATRRREGEESSCQEKTK 60

Query: 80  KNSWVFFSFHKPNIAFGIHKLI 15
            N++   +  KPN++ G++KL+
Sbjct: 61  SNTFSSLALPKPNMSSGMYKLV 82


>ref|XP_002514856.1| conserved hypothetical protein [Ricinus communis]
           gi|223545907|gb|EEF47410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
 Frame = -1

Query: 257 MRDIVKRFVVFPFSMGCVSQSCTQVG-SVHPRKSSKSGSDSD---VITRRQEGEEERPSE 90
           MRD ++R V+ PFS+GCVS+S   +G  VH  + SK   DS+   +I  ++E EE   S 
Sbjct: 1   MRDRMERLVLLPFSIGCVSESSVAIGHHVHHPRGSKPPPDSNPSPIIRTKEEDEESLSST 60

Query: 89  IKMKNSWVFFSFHKPNIAFGIHKLI 15
             MKN+   F+  KPNI+   H+++
Sbjct: 61  ESMKNAMKVFALSKPNISNRFHRIV 85


>ref|XP_002325902.1| predicted protein [Populus trichocarpa] gi|118481449|gb|ABK92667.1|
           unknown [Populus trichocarpa]
           gi|222862777|gb|EEF00284.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/81 (38%), Positives = 48/81 (59%)
 Frame = -1

Query: 257 MRDIVKRFVVFPFSMGCVSQSCTQVGSVHPRKSSKSGSDSDVITRRQEGEEERPSEIKMK 78
           MRD ++R V+ PFS+GCVS+S   +G VH  K +K+ ++      ++E EE   S    K
Sbjct: 1   MRDRMERLVLLPFSIGCVSESSVAIG-VHQTKRAKTDTNLSASRTQEEDEESSSSTESTK 59

Query: 77  NSWVFFSFHKPNIAFGIHKLI 15
           NS    +  KPN++ G +KL+
Sbjct: 60  NSLKLLALSKPNVSTGFNKLV 80


>ref|XP_003621682.1| hypothetical protein MTR_7g021660 [Medicago truncatula]
           gi|355496697|gb|AES77900.1| hypothetical protein
           MTR_7g021660 [Medicago truncatula]
           gi|388508906|gb|AFK42519.1| unknown [Medicago
           truncatula]
          Length = 170

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/81 (41%), Positives = 47/81 (58%)
 Frame = -1

Query: 257 MRDIVKRFVVFPFSMGCVSQSCTQVGSVHPRKSSKSGSDSDVITRRQEGEEERPSEIKMK 78
           MR+ ++R VV PFS  C S S  ++G    +K  K  S   + +RRQEG+    ++IK K
Sbjct: 1   MRNHMERLVVLPFSFRCASNSSVELGE---QKGQKIDSKDSIDSRRQEGQVIITTKIKKK 57

Query: 77  NSWVFFSFHKPNIAFGIHKLI 15
            S  FF   KPN+A GI +LI
Sbjct: 58  RSSGFFVLPKPNVAAGIQRLI 78


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