BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037995
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi...   212   3e-53
ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|2...   207   7e-52
ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]   199   3e-49
ref|XP_002885037.1| pentatricopeptide repeat-containing protein ...   198   4e-49

>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  212 bits (539), Expect = 3e-53
 Identities = 92/129 (71%), Positives = 111/129 (86%)
 Frame = -1

Query: 490 IKHRVHTFVAGGSSAFRNTKEFRELWNELMEAMEKIGYVPDTRSVLHDVDDEMKTEWVCG 311
           IK ++HTFVAGGS+ FRN+ E++++W  LMEAME++GYVPDT  VLHDV +EM+  WVCG
Sbjct: 524 IKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCG 583

Query: 310 HSERLAAMFSLIHTGSGMPVRITKNLRVCVDCHTWMKYASTVTGRVIILRDTNRFHQFKQ 131
           HSERLA MF+LI+T SGMP+RITKNLRVCVDCH+W+K  S VTGRVI+LRDTNRFH FK 
Sbjct: 584 HSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKD 643

Query: 130 GTCSCQDYW 104
           G CSC+DYW
Sbjct: 644 GVCSCKDYW 652


>ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|222843383|gb|EEE80930.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  207 bits (527), Expect = 7e-52
 Identities = 87/129 (67%), Positives = 110/129 (85%)
 Frame = -1

Query: 490 IKHRVHTFVAGGSSAFRNTKEFRELWNELMEAMEKIGYVPDTRSVLHDVDDEMKTEWVCG 311
           +K+++H+FVAGG   FRN+ E++++WN+L EAME+ GY+P+T  VLHDV++E K  WVCG
Sbjct: 376 VKNKIHSFVAGGGFEFRNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNEETKAMWVCG 435

Query: 310 HSERLAAMFSLIHTGSGMPVRITKNLRVCVDCHTWMKYASTVTGRVIILRDTNRFHQFKQ 131
           HSERLA +FSLIHT +GMP+RITKNLRVCVDCH+W+K  S VTGRVI+LRDTNRFH FK+
Sbjct: 436 HSERLATVFSLIHTAAGMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKE 495

Query: 130 GTCSCQDYW 104
           G CSC DYW
Sbjct: 496 GACSCNDYW 504


>ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  203 bits (517), Expect = 1e-50
 Identities = 87/129 (67%), Positives = 112/129 (86%)
 Frame = -1

Query: 490 IKHRVHTFVAGGSSAFRNTKEFRELWNELMEAMEKIGYVPDTRSVLHDVDDEMKTEWVCG 311
           IKH++HTFVAGGSS FR + E++++WNEL  A++ +GYVP+T  VLHD+++EMK  WVC 
Sbjct: 522 IKHKIHTFVAGGSSDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCE 581

Query: 310 HSERLAAMFSLIHTGSGMPVRITKNLRVCVDCHTWMKYASTVTGRVIILRDTNRFHQFKQ 131
           HSERLAA+F+LI+TG+GMP+RITKNLRVCVDCH+WMK  S VT R+I+LRDTNRFH F+ 
Sbjct: 582 HSERLAAVFALINTGAGMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFEN 641

Query: 130 GTCSCQDYW 104
           G+CSC+DYW
Sbjct: 642 GSCSCKDYW 650


>emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  199 bits (505), Expect = 3e-49
 Identities = 88/124 (70%), Positives = 106/124 (85%)
 Frame = -1

Query: 490 IKHRVHTFVAGGSSAFRNTKEFRELWNELMEAMEKIGYVPDTRSVLHDVDDEMKTEWVCG 311
           IK ++HTFVAGGS+ FRN+ E++++W  LMEAME++GYVPDT  VLHDV +EM+  WVCG
Sbjct: 523 IKSKIHTFVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCG 582

Query: 310 HSERLAAMFSLIHTGSGMPVRITKNLRVCVDCHTWMKYASTVTGRVIILRDTNRFHQFKQ 131
           HSERLA MF+LI+T SGMP+RITKNLRVCVDCH+W+K  S VTGRVI+LRDTNRFH FK 
Sbjct: 583 HSERLATMFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKD 642

Query: 130 GTCS 119
           G CS
Sbjct: 643 GVCS 646



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 298 LAAMFSLIHTGSGMPVRITKNLRVCVDCHTWMKYASTVTG 179
           LA MF+LI+T SGMP+RITKNL VCVDCH+W+K  S  TG
Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNTG 739


>ref|XP_002885037.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330877|gb|EFH61296.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 690

 Score =  198 bits (503), Expect = 4e-49
 Identities = 86/129 (66%), Positives = 102/129 (79%)
 Frame = -1

Query: 490 IKHRVHTFVAGGSSAFRNTKEFRELWNELMEAMEKIGYVPDTRSVLHDVDDEMKTEWVCG 311
           +K ++  FVAGG   FRN+ E++++W EL EA+EK GY PDT  VLHDVD+E K  WVCG
Sbjct: 562 VKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPDTSVVLHDVDEETKANWVCG 621

Query: 310 HSERLAAMFSLIHTGSGMPVRITKNLRVCVDCHTWMKYASTVTGRVIILRDTNRFHQFKQ 131
           HSERLAA +SLIHTG G+PVR+TKNLRVC DCH+WMK  S VTGRVI+LRDT RFH F  
Sbjct: 622 HSERLAATYSLIHTGEGVPVRVTKNLRVCADCHSWMKIVSQVTGRVIVLRDTKRFHHFVA 681

Query: 130 GTCSCQDYW 104
           G CSC+DYW
Sbjct: 682 GICSCKDYW 690