BLASTX nr result

ID: Bupleurum21_contig00037983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037983
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003571836.1| PREDICTED: uncharacterized protein LOC100834...   119   3e-25
emb|CCI55449.1| PH01B001E05.5 [Phyllostachys edulis]                  115   4e-24
gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subc...   107   1e-21
ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group] g...   107   1e-21
gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subc...   105   4e-21

>ref|XP_003571836.1| PREDICTED: uncharacterized protein LOC100834324 [Brachypodium
           distachyon]
          Length = 295

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/96 (59%), Positives = 74/96 (77%)
 Frame = -2

Query: 291 LGAERVKAARIQTLKSEFESLSMKETEALDDFCMKLNGLVTTIRALGEEVQEAYVVKKLL 112
           L  +R+K AR+QTL SEF  L +K+TE +DDF +++  ++  IR LGE+ +E Y VKK L
Sbjct: 91  LADDRIKEARVQTLTSEFHRLQVKDTEFVDDFTLRMTTIINEIRVLGEKFEELYAVKKFL 150

Query: 111 RAVPSKFLQIVSTIEQFGDLETMTIEEIVGSLKAHE 4
           RAVPSK LQI S IEQFG+L+TMT+EE+VG LKAHE
Sbjct: 151 RAVPSKVLQIASAIEQFGNLKTMTMEEVVGRLKAHE 186


>emb|CCI55449.1| PH01B001E05.5 [Phyllostachys edulis]
          Length = 303

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/99 (55%), Positives = 77/99 (77%)
 Frame = -2

Query: 297 MCLGAERVKAARIQTLKSEFESLSMKETEALDDFCMKLNGLVTTIRALGEEVQEAYVVKK 118
           M LGA+RV+ AR+Q LKSEF++L M++TE +DDF M L  +V+ IR LG++++E Y+V+K
Sbjct: 111 MHLGADRVREARVQNLKSEFDNLHMRDTEQIDDFTMGLMTIVSKIRGLGDKMEEVYIVRK 170

Query: 117 LLRAVPSKFLQIVSTIEQFGDLETMTIEEIVGSLKAHEE 1
            LRAV  KF  I STIEQFGD++ M+I+E++  LK HEE
Sbjct: 171 FLRAVSRKFSPIASTIEQFGDIKNMSIKELIERLKTHEE 209


>gb|ABA96315.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 271

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/97 (54%), Positives = 71/97 (73%)
 Frame = -2

Query: 291 LGAERVKAARIQTLKSEFESLSMKETEALDDFCMKLNGLVTTIRALGEEVQEAYVVKKLL 112
           LG +RVK AR+QTLKSEF++L MK+TE +D+F  K++GL   +  LG  + +  +VKKLL
Sbjct: 99  LGVDRVKKARVQTLKSEFKALCMKKTETIDEFAGKISGLANAMSGLGATMTDDELVKKLL 158

Query: 111 RAVPSKFLQIVSTIEQFGDLETMTIEEIVGSLKAHEE 1
            +VP KFL I++ IEQF DL+TM  EE +G LKA EE
Sbjct: 159 DSVPEKFLHIIAAIEQFCDLDTMPFEEAIGRLKAFEE 195


>ref|NP_001063866.1| Os09g0551200 [Oryza sativa Japonica Group]
           gi|113632099|dbj|BAF25780.1| Os09g0551200 [Oryza sativa
           Japonica Group]
          Length = 280

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/97 (54%), Positives = 71/97 (73%)
 Frame = -2

Query: 291 LGAERVKAARIQTLKSEFESLSMKETEALDDFCMKLNGLVTTIRALGEEVQEAYVVKKLL 112
           LG +RVK AR+QTLKSEF++L MK+TE +D+F  K++GL   +  LG  + +  +VKKLL
Sbjct: 108 LGVDRVKKARVQTLKSEFKALCMKKTETIDEFAGKISGLANAMSGLGATMTDDELVKKLL 167

Query: 111 RAVPSKFLQIVSTIEQFGDLETMTIEEIVGSLKAHEE 1
            +VP KFL I++ IEQF DL+TM  EE +G LKA EE
Sbjct: 168 DSVPEKFLHIIAAIEQFCDLDTMPFEEAIGRLKAFEE 204


>gb|ABA97288.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
           [Oryza sativa Japonica Group]
          Length = 904

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/97 (51%), Positives = 72/97 (74%)
 Frame = -2

Query: 291 LGAERVKAARIQTLKSEFESLSMKETEALDDFCMKLNGLVTTIRALGEEVQEAYVVKKLL 112
           LG ERVK AR+QTLKS+F++L MK+TE++D+F  K++GL   +  LG  + +   VKKLL
Sbjct: 521 LGVERVKKARVQTLKSDFKALHMKDTESIDEFAGKISGLANKLSDLGVTMDDDEQVKKLL 580

Query: 111 RAVPSKFLQIVSTIEQFGDLETMTIEEIVGSLKAHEE 1
            +VP KFL +++ IEQF DL++M  +E +G LKA+EE
Sbjct: 581 DSVPDKFLHVIAAIEQFSDLDSMPFDEAIGRLKAYEE 617


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