BLASTX nr result

ID: Bupleurum21_contig00037954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037954
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312698.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002334953.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002520202.1| actin binding protein, putative [Ricinus com...    92   6e-17
gb|ACB59209.1| group I formin [Brassica oleracea]                      89   5e-16

>ref|XP_002312698.1| predicted protein [Populus trichocarpa] gi|222852518|gb|EEE90065.1|
           predicted protein [Populus trichocarpa]
          Length = 783

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/90 (53%), Positives = 64/90 (71%)
 Frame = +2

Query: 56  DSSKPKEEMENEYIMLGLPIVGGISSQFSNVKKAATLDYDALHKACSALFEDVAEIRKLV 235
           ++S  KE+ E EY+MLGLP VGG+S++FSNVKKAA +DYDA    CS L     E+R  V
Sbjct: 576 ENSTSKEKREKEYMMLGLPAVGGLSAEFSNVKKAALIDYDAFASTCSVLAARAREVRAFV 635

Query: 236 GECAISGGGEGFIKEMKVFLDAAEGESQAV 325
            +CA + G  GF+KEMK FL+AAE E +++
Sbjct: 636 SQCAAANGEGGFVKEMKGFLEAAEEELKSL 665


>ref|XP_002334953.1| predicted protein [Populus trichocarpa] gi|222832466|gb|EEE70943.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/90 (53%), Positives = 64/90 (71%)
 Frame = +2

Query: 56  DSSKPKEEMENEYIMLGLPIVGGISSQFSNVKKAATLDYDALHKACSALFEDVAEIRKLV 235
           ++S  KE+ E EY+MLGLP VGG+S++FSNVKKAA +DYDA    CS L     E+R  V
Sbjct: 120 ENSTSKEKREKEYMMLGLPAVGGLSAEFSNVKKAALIDYDAFASTCSVLAARAREVRAFV 179

Query: 236 GECAISGGGEGFIKEMKVFLDAAEGESQAV 325
            +CA + G  GF+KEMK FL+AAE E +++
Sbjct: 180 SQCAAANGEGGFVKEMKGFLEAAEEELKSL 209


>ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|222852588|gb|EEE90135.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/86 (53%), Positives = 58/86 (67%)
 Frame = +2

Query: 56  DSSKPKEEMENEYIMLGLPIVGGISSQFSNVKKAATLDYDALHKACSALFEDVAEIRKLV 235
           + S  K E E EY+MLGLP VGG+S +FSNVKKAA +DYD     CSAL     E+R  +
Sbjct: 568 EDSASKGEREKEYMMLGLPAVGGLSIEFSNVKKAAQIDYDTFAATCSALATGAREVRAFM 627

Query: 236 GECAISGGGEGFIKEMKVFLDAAEGE 313
            +CA + G  GF++EMK FL+AAE E
Sbjct: 628 SQCAAANGEGGFVREMKGFLEAAEEE 653


>ref|XP_002520202.1| actin binding protein, putative [Ricinus communis]
           gi|223540694|gb|EEF42257.1| actin binding protein,
           putative [Ricinus communis]
          Length = 849

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/91 (51%), Positives = 65/91 (71%)
 Frame = +2

Query: 56  DSSKPKEEMENEYIMLGLPIVGGISSQFSNVKKAATLDYDALHKACSALFEDVAEIRKLV 235
           D+S  K+E E EYIMLGLP+VGG+S++FSNVKKAA +DY++     SAL   VAE+R + 
Sbjct: 658 DNSASKDEREKEYIMLGLPMVGGLSAEFSNVKKAAQIDYNSFAGTYSALTARVAEVRLIA 717

Query: 236 GECAISGGGEGFIKEMKVFLDAAEGESQAVK 328
            +CA +G G  F  EMK F++AAE E + ++
Sbjct: 718 SQCAANGEG-NFANEMKSFVEAAEYELKVLR 747


>gb|ACB59209.1| group I formin [Brassica oleracea]
          Length = 719

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/86 (50%), Positives = 59/86 (68%)
 Frame = +2

Query: 71  KEEMENEYIMLGLPIVGGISSQFSNVKKAATLDYDALHKACSALFEDVAEIRKLVGECAI 250
           KEE E EY+ LGLP+VGG+SS+FSNVKKAA++DYD +   C AL     E R+++ +C  
Sbjct: 544 KEEQEKEYLRLGLPVVGGLSSEFSNVKKAASIDYDTVSATCLALTSRAKEARRVLSQC-- 601

Query: 251 SGGGEGFIKEMKVFLDAAEGESQAVK 328
            GG   F+++M  FLDAAE E +  +
Sbjct: 602 -GGDNRFVEKMVEFLDAAEEEVKVAR 626


Top