BLASTX nr result

ID: Bupleurum21_contig00037902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037902
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   159   3e-37
ref|XP_003531307.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   157   1e-36
ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arab...   153   1e-35
ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana...   152   3e-35
ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thali...   152   3e-35

>ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|296087462|emb|CBI34051.3| unnamed protein product
           [Vitis vinifera]
          Length = 417

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/86 (87%), Positives = 78/86 (90%)
 Frame = +3

Query: 3   VGIYNVGTGKGSSVKEFVEACKKATGVPIKVEYLSRRPGDYAEVYSDPSKIKRELNWVAK 182
           VGIYNVGTGKG SVKEFVEACKKATGV IKVEYL RRPGDYAEVYSDPSKI RELNW A+
Sbjct: 328 VGIYNVGTGKGRSVKEFVEACKKATGVDIKVEYLDRRPGDYAEVYSDPSKILRELNWTAQ 387

Query: 183 YTNLEESLKTAWIWQKSHRNGYGDPM 260
           YTNL+ESL+TAW WQKSHRNGYG  M
Sbjct: 388 YTNLQESLQTAWRWQKSHRNGYGTRM 413


>ref|XP_003531307.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max]
          Length = 416

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/83 (87%), Positives = 79/83 (95%)
 Frame = +3

Query: 3   VGIYNVGTGKGSSVKEFVEACKKATGVPIKVEYLSRRPGDYAEVYSDPSKIKRELNWVAK 182
           VGIYNVGTGKGSSVKEFVEACKKATGV IKV+YL RRPGDYAEVYSDPSKIKRELNWVAK
Sbjct: 328 VGIYNVGTGKGSSVKEFVEACKKATGVDIKVDYLPRRPGDYAEVYSDPSKIKRELNWVAK 387

Query: 183 YTNLEESLKTAWIWQKSHRNGYG 251
           +T+L++SLK AW WQKSHR+GYG
Sbjct: 388 HTDLQQSLKVAWRWQKSHRDGYG 410


>ref|XP_002890883.1| hypothetical protein ARALYDRAFT_890616 [Arabidopsis lyrata subsp.
           lyrata] gi|297336725|gb|EFH67142.1| hypothetical protein
           ARALYDRAFT_890616 [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/83 (85%), Positives = 77/83 (92%)
 Frame = +3

Query: 3   VGIYNVGTGKGSSVKEFVEACKKATGVPIKVEYLSRRPGDYAEVYSDPSKIKRELNWVAK 182
           VGIYNVGTGKGSSVKEFVEACKKATGV IK+EYL RR GDYAEVYSDPSKI++ELNW AK
Sbjct: 328 VGIYNVGTGKGSSVKEFVEACKKATGVEIKIEYLPRRAGDYAEVYSDPSKIRKELNWTAK 387

Query: 183 YTNLEESLKTAWIWQKSHRNGYG 251
           +TNL+ESL+TAW WQK HRNGYG
Sbjct: 388 HTNLKESLETAWRWQKLHRNGYG 410


>ref|NP_174350.2| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|79318985|ref|NP_001031118.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|75313130|sp|Q9SA77.1|ARAE1_ARATH RecName:
           Full=UDP-arabinose 4-epimerase 1; AltName:
           Full=UDP-D-xylose 4-epimerase 1
           gi|4587518|gb|AAD25749.1|AC007060_7 Strong similarity to
           F19I3.8 gi|3033381 putative UDP-galactose-4-epimerase
           from Arabidopsis thaliana BAC gb|AC004238 and is a
           member of PF|01370 the NAD dependent
           epimerase/dehydratase family. EST gb|AA597338 comes from
           this gene [Arabidopsis thaliana]
           gi|13272475|gb|AAK17176.1|AF325108_1 unknown protein
           [Arabidopsis thaliana] gi|18086329|gb|AAL57628.1|
           At1g30620/T5I8_7 [Arabidopsis thaliana]
           gi|27363222|gb|AAO11530.1| At1g30620/T5I8_7 [Arabidopsis
           thaliana] gi|28395529|gb|AAO39213.1| UDP-D-xylose
           4-epimerase [Arabidopsis thaliana]
           gi|222423784|dbj|BAH19858.1| AT1G30620 [Arabidopsis
           thaliana] gi|332193130|gb|AEE31251.1| UDP-arabinose
           4-epimerase [Arabidopsis thaliana]
           gi|332193131|gb|AEE31252.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 419

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +3

Query: 3   VGIYNVGTGKGSSVKEFVEACKKATGVPIKVEYLSRRPGDYAEVYSDPSKIKRELNWVAK 182
           VGIYNVGTGKGSSVKEFVEACKKATGV IK++YL RR GDYAEVYSDPSKI++ELNW AK
Sbjct: 328 VGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAK 387

Query: 183 YTNLEESLKTAWIWQKSHRNGYG 251
           +TNL+ESL+TAW WQK HRNGYG
Sbjct: 388 HTNLKESLETAWRWQKLHRNGYG 410


>ref|NP_001077632.1| UDP-arabinose 4-epimerase [Arabidopsis thaliana]
           gi|332193132|gb|AEE31253.1| UDP-arabinose 4-epimerase
           [Arabidopsis thaliana]
          Length = 418

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = +3

Query: 3   VGIYNVGTGKGSSVKEFVEACKKATGVPIKVEYLSRRPGDYAEVYSDPSKIKRELNWVAK 182
           VGIYNVGTGKGSSVKEFVEACKKATGV IK++YL RR GDYAEVYSDPSKI++ELNW AK
Sbjct: 327 VGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGDYAEVYSDPSKIRKELNWTAK 386

Query: 183 YTNLEESLKTAWIWQKSHRNGYG 251
           +TNL+ESL+TAW WQK HRNGYG
Sbjct: 387 HTNLKESLETAWRWQKLHRNGYG 409


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