BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037898
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    95   5e-18
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    92   4e-17
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    92   6e-17
gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...    91   1e-16

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
 Frame = +2

Query: 2   FTERDQACIRRTKIANHGEMDVIYWSREKHGNYSVRSAYRLLQSHKAYWSPSDNNSLWRK 181
           F  RD+  I    + N    D  YW  +  GNY V++ YRLLQ            S W K
Sbjct: 375 FNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLVKNCYRLLQGDLG----RPETSFWNK 430

Query: 182 IWCIKVPAKVLNLVWRSLSYCLPTVVMLQQKGVEVESICPVCRRDPETIDHVFLQCPVAV 361
            W +K+P KV NL+W+  S C+ T + L+ + V+++ +C  C R+PET+ HV   C +A 
Sbjct: 431 FWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMAR 490

Query: 362 QCWQKI-----IPNV*CQ*ANLTQWREGVLKNCDNNKKEEVASVCWSLW 493
           +CW  +      P      + +  W +    +   +   ++A VC SLW
Sbjct: 491 ECWDLLGFRFSFPTE----SPICSWIQNFFIDNHEDTCAKMALVCGSLW 535


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
 Frame = +2

Query: 2    FTERDQACIRRTKIANHGEMDVIYWSREKHGNYSVRSAYRLLQSHKAYWSPSDNN----- 166
            F E     I +  ++ HG  D I W  +K G +SVRSAY L +S     + S+N      
Sbjct: 553  FDETTAQQILQIPVSAHGGEDFISWPHDKRGVFSVRSAYNLARSEIFMAAQSENGRGMLS 612

Query: 167  ------SLWRKIWCIKVPAKVLNLVWRSLSYCLPTVVMLQQKGVEVESICPVCRRDPETI 328
                  + W+++W I  P K+L  +WR +  CLP+   L+++ +     C  C RD + I
Sbjct: 613  GLQESANRWKELWRINAPGKMLTNLWRIVHDCLPSGFQLRRRHIPATDGCCFCERD-DRI 671

Query: 329  DHVFLQCPVAVQCWQKI-----IPNV*CQ*ANLTQWREGVLKNCDNNKKEEVASVCWSLW 493
            +H+FL CP AV  W  I     +       +N+ QW    L    N +K  +A   W +W
Sbjct: 672  EHIFLLCPFAVCIWDSIKQHFDLKLCMTDLSNMKQWVFDFLGRSSNIQKTALAVTLWHIW 731

Query: 494  KA 499
            +A
Sbjct: 732  EA 733


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
 Frame = +2

Query: 2   FTERDQACIRRTKIANHGEMDVIYWSREKHGNYSVRSAYRLLQSHKAYWSPSDNNSLWRK 181
           F+ERD+  I    ++     D ++W ++  G +SV+  YR+ Q   +   PS N  +WR+
Sbjct: 128 FSERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSVKDVYRVQQPDFSVLYPS-NVVVWRR 186

Query: 182 IWCIKVPAKVLNLVWRSLSYCLPTVVMLQQKGVEVESICPVCRRDPETIDHVFLQCPVAV 361
           +W + + AK    +WR+L+  LP    L  + V  +S CP C   PETI H+ + C V  
Sbjct: 187 LWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCDVTT 246

Query: 362 QCWQKI-IPNV*CQ*ANLTQWREGVLKNCDNNKKEEVASVCWSLW 493
           Q W+ + +     Q +NL +    V ++ D++       + WSLW
Sbjct: 247 QSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLW 291


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
 Frame = +2

Query: 2   FTERDQACIRRTKIANHGEMDVIYWSREKHGNYSVRSAYRLL----QSHKAYWSPSDNNS 169
           F  RD   I    +      D I WS +  G Y+ RS Y  L    QS     S  D+N 
Sbjct: 447 FMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNF 506

Query: 170 LWRKIWCIKVPAKVLNLVWRSLSYCLPTVVMLQQKGVEVESICPVCRRDPETIDHVFLQC 349
           +W ++W +  P K+LN  WR+   CLPT   L  + V+    CP+CR + ET  H  ++C
Sbjct: 507 VWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVEC 566

Query: 350 PVAVQCWQKI-IPNV*CQ*ANLTQWREGVLKNCDNNKKEEVASVCWSLW 493
             A   W +  +  +     +   W   +   CD     +  +VCW LW
Sbjct: 567 VAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLW 615


>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/117 (36%), Positives = 62/117 (52%)
 Frame = +2

Query: 26  IRRTKIANHGEMDVIYWSREKHGNYSVRSAYRLLQSHKAYWSPSDNNSLWRKIWCIKVPA 205
           I +T +    + D+  W  EK GNYS+RSAY  + ++    +    N  W  IW +K+P 
Sbjct: 164 IYKTPLLPSVQQDIATWRFEKDGNYSIRSAYCDILNNNTALNQHRVNGSWNSIWNLKLPP 223

Query: 206 KVLNLVWRSLSYCLPTVVMLQQKGVEVESICPVCRRDPETIDHVFLQCPVAVQCWQK 376
           KV N +WR+   CLPT V LQ +GV+    C V     E   H+F  C  ++ CWQ+
Sbjct: 224 KVKNFMWRACRNCLPTRVKLQSRGVQCPMDCAVYAGPYEDSSHLFFDCGKSISCWQR 280