BLASTX nr result

ID: Bupleurum21_contig00037878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037878
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vi...    58   7e-07
emb|CBI17857.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_003610075.1| Villin-4 [Medicago truncatula] gi|355511130|...    57   2e-06
ref|NP_001058263.1| Os06g0659300 [Oryza sativa Japonica Group] g...    56   3e-06
gb|EEE66162.1| hypothetical protein OsJ_22231 [Oryza sativa Japo...    56   3e-06

>ref|XP_002268471.2| PREDICTED: LOW QUALITY PROTEIN: villin-4 [Vitis vinifera]
          Length = 1002

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 152 VWQWDGDRRSSFVCSEVIKFYSGDCYIFSFSYTGELGDGHVVGTWLERQT 301
           VW+ +G  ++    S+  KFYSGDCYIF +SY GE  + H++GTW  +Q+
Sbjct: 437 VWRVNGQEKTLLSASDQSKFYSGDCYIFQYSYPGEDKEEHLIGTWFGKQS 486


>emb|CBI17857.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 152 VWQWDGDRRSSFVCSEVIKFYSGDCYIFSFSYTGELGDGHVVGTWLERQT 301
           VW+ +G  ++    S+  KFYSGDCYIF +SY GE  + H++GTW  +Q+
Sbjct: 396 VWRVNGQEKTLLSASDQSKFYSGDCYIFQYSYPGEDKEEHLIGTWFGKQS 445


>ref|XP_003610075.1| Villin-4 [Medicago truncatula] gi|355511130|gb|AES92272.1| Villin-4
           [Medicago truncatula]
          Length = 958

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = +2

Query: 152 VWQWDGDRRSSFVCSEVIKFYSGDCYIFSFSYTGELGDGHVVGTWLERQT 301
           VW+ +G  ++    ++  KFYSGDCYIF +SY GE  + H++GTW+ + +
Sbjct: 396 VWRVNGQEKNLLAATDQSKFYSGDCYIFQYSYPGEDREEHLIGTWIGKNS 445


>ref|NP_001058263.1| Os06g0659300 [Oryza sativa Japonica Group]
           gi|51536172|dbj|BAD38345.1| putative villin 2 [Oryza
           sativa Japonica Group] gi|52077361|dbj|BAD46401.1|
           putative villin 2 [Oryza sativa Japonica Group]
           gi|113596303|dbj|BAF20177.1| Os06g0659300 [Oryza sativa
           Japonica Group]
          Length = 1016

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 152 VWQWDGDRRSSFVCSEVIKFYSGDCYIFSFSYTGELGDGHVVGTWLERQT 301
           VW+ +G  ++    SE  KFYSGDCYIF +SY GE G+  ++GTW  +++
Sbjct: 444 VWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECLIGTWFGKKS 493


>gb|EEE66162.1| hypothetical protein OsJ_22231 [Oryza sativa Japonica Group]
          Length = 1002

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 152 VWQWDGDRRSSFVCSEVIKFYSGDCYIFSFSYTGELGDGHVVGTWLERQT 301
           VW+ +G  ++    SE  KFYSGDCYIF +SY GE G+  ++GTW  +++
Sbjct: 430 VWRVNGTEKTFLSFSEQCKFYSGDCYIFQYSYPGEEGEECLIGTWFGKKS 479


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