BLASTX nr result

ID: Bupleurum21_contig00037863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037863
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   186   1e-45
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   186   1e-45
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   186   1e-45
ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group] g...   182   3e-44
gb|ABA96519.2| hypothetical protein LOC_Os12g06230 [Oryza sativa...   181   5e-44

>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/145 (62%), Positives = 117/145 (80%)
 Frame = -3

Query: 435  LNDKQRKIYDILIKNVMEKNGGLFFVYGHGGTGKTFLWKTIISTLRSKEKVVLAVASSGI 256
            LN++Q  IY+ +I  V    GGL+FVYGHGGTGKTFL++TII+ LRS++K+VLAVASSGI
Sbjct: 940  LNEQQIDIYNNVINAVNTNIGGLYFVYGHGGTGKTFLYRTIIAKLRSEKKIVLAVASSGI 999

Query: 255  ASLLIEGGRTAHSRFKIPLNIYENSTCGIKQNSFLAELICHTDLVVWDEAPMNHRHIFEA 76
            ASLL+ GGRTAHSRFKIPL IYE+STC I QN+ LA+L+  TDL++WDEAPM  R+ FEA
Sbjct: 1000 ASLLLPGGRTAHSRFKIPLEIYEDSTCSINQNTHLADLMVQTDLIIWDEAPMTQRYAFEA 1059

Query: 75   VDRSFRDIMRRQDPNNMDKLFGGKT 1
            +DR+ +DI+  + P+  ++ FGG T
Sbjct: 1060 LDRTLKDIIGFKFPDRAEQPFGGMT 1084


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1531

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/145 (62%), Positives = 117/145 (80%)
 Frame = -3

Query: 435  LNDKQRKIYDILIKNVMEKNGGLFFVYGHGGTGKTFLWKTIISTLRSKEKVVLAVASSGI 256
            LN++Q  IY+ +I  V    GGL+FVYGHGGTGKTFL++TII+ LRS++K+VLAVASSGI
Sbjct: 913  LNEQQIDIYNNVINAVNTNIGGLYFVYGHGGTGKTFLYRTIIAKLRSEKKIVLAVASSGI 972

Query: 255  ASLLIEGGRTAHSRFKIPLNIYENSTCGIKQNSFLAELICHTDLVVWDEAPMNHRHIFEA 76
            ASLL+ GGRTAHSRFKIPL IYE+STC I QN+ LA+L+  TDL++WDEAPM  R+ FEA
Sbjct: 973  ASLLLPGGRTAHSRFKIPLEIYEDSTCSINQNTHLADLMVQTDLIIWDEAPMTQRYAFEA 1032

Query: 75   VDRSFRDIMRRQDPNNMDKLFGGKT 1
            +DR+ +DI+  + P+  ++ FGG T
Sbjct: 1033 LDRTLKDIIGFKFPDRAEQPFGGMT 1057


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1558

 Score =  186 bits (473), Expect = 1e-45
 Identities = 90/145 (62%), Positives = 117/145 (80%)
 Frame = -3

Query: 435  LNDKQRKIYDILIKNVMEKNGGLFFVYGHGGTGKTFLWKTIISTLRSKEKVVLAVASSGI 256
            LN++Q  IY+ +I  V    GGL+FVYGHGGTGKTFL++TII+ LRS++K+VLAVASSGI
Sbjct: 940  LNEQQIDIYNNVINAVNTNIGGLYFVYGHGGTGKTFLYRTIIAKLRSEKKIVLAVASSGI 999

Query: 255  ASLLIEGGRTAHSRFKIPLNIYENSTCGIKQNSFLAELICHTDLVVWDEAPMNHRHIFEA 76
            ASLL+ GGRTAHSRFKIPL IYE+STC I QN+ LA+L+  TDL++WDEAPM  R+ FEA
Sbjct: 1000 ASLLLPGGRTAHSRFKIPLEIYEDSTCSINQNTHLADLMVQTDLIIWDEAPMTQRYAFEA 1059

Query: 75   VDRSFRDIMRRQDPNNMDKLFGGKT 1
            +DR+ +DI+  + P+  ++ FGG T
Sbjct: 1060 LDRTLKDIIGFKFPDRAEQPFGGMT 1084


>ref|NP_001043325.1| Os01g0556600 [Oryza sativa Japonica Group]
            gi|113532856|dbj|BAF05239.1| Os01g0556600 [Oryza sativa
            Japonica Group]
          Length = 1932

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/144 (59%), Positives = 111/144 (77%)
 Frame = -3

Query: 435  LNDKQRKIYDILIKNVMEKNGGLFFVYGHGGTGKTFLWKTIISTLRSKEKVVLAVASSGI 256
            LN  QR +++ +++ V E   GLFFVYGHGGTGKTFLW T+IS +RS++K+VLAVASSG+
Sbjct: 932  LNTDQRNVFNTIMQRVNENRPGLFFVYGHGGTGKTFLWNTLISKIRSEKKIVLAVASSGV 991

Query: 255  ASLLIEGGRTAHSRFKIPLNIYENSTCGIKQNSFLAELICHTDLVVWDEAPMNHRHIFEA 76
            ASLL+  GRTAHSRFKIP++I EN+ C IK+ + LA+LI  T L++WDEAPM HR  FEA
Sbjct: 992  ASLLLPRGRTAHSRFKIPIDIDENNICTIKRGTMLADLIQKTSLIIWDEAPMTHRRCFEA 1051

Query: 75   VDRSFRDIMRRQDPNNMDKLFGGK 4
            +DR+ RD++    P+N    FGGK
Sbjct: 1052 LDRTLRDLLSEHTPSNSIVPFGGK 1075


>gb|ABA96519.2| hypothetical protein LOC_Os12g06230 [Oryza sativa Japonica Group]
          Length = 2279

 Score =  181 bits (459), Expect = 5e-44
 Identities = 85/144 (59%), Positives = 109/144 (75%)
 Frame = -3

Query: 435  LNDKQRKIYDILIKNVMEKNGGLFFVYGHGGTGKTFLWKTIISTLRSKEKVVLAVASSGI 256
            LN  QR ++D +++ V +   G FFVYGHGGTGKTFLW  +IS +RS++K+VLAVASSG+
Sbjct: 1131 LNIDQRNVFDTIMQRVNDSKPGFFFVYGHGGTGKTFLWNALISKIRSEKKIVLAVASSGV 1190

Query: 255  ASLLIEGGRTAHSRFKIPLNIYENSTCGIKQNSFLAELICHTDLVVWDEAPMNHRHIFEA 76
            ASLL+  GRTAHSRFKIP++I ENS C IK+ + LAELI  T L++WDEAPM HR  FEA
Sbjct: 1191 ASLLLPRGRTAHSRFKIPIDITENSICTIKRGTMLAELIQKTSLIIWDEAPMTHRRCFEA 1250

Query: 75   VDRSFRDIMRRQDPNNMDKLFGGK 4
            +DR+ RD++    P+N    FGGK
Sbjct: 1251 LDRTLRDLLSEHTPSNSIVPFGGK 1274


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