BLASTX nr result

ID: Bupleurum21_contig00037818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037818
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514286.1| hypothetical protein RCOM_1052490 [Ricinus c...    98   8e-19
ref|XP_002324996.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002280856.2| PREDICTED: uncharacterized protein LOC100250...    73   3e-11
emb|CBI28056.3| unnamed protein product [Vitis vinifera]               73   3e-11
emb|CAN70392.1| hypothetical protein VITISV_020518 [Vitis vinifera]    66   3e-09

>ref|XP_002514286.1| hypothetical protein RCOM_1052490 [Ricinus communis]
           gi|223546742|gb|EEF48240.1| hypothetical protein
           RCOM_1052490 [Ricinus communis]
          Length = 887

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
 Frame = +2

Query: 2   RDCYDELREVIRDSLARQNLLPQQSARETAHFERKKMNPYADMPXXXXXXXXXXXXXXXX 181
           RDC +ELR  IRD LARQNLL   S +E   F+++KM+  +  P                
Sbjct: 182 RDCIEELRNAIRDGLARQNLLSNTSRQENIKFDKRKMDSISHFPSTSSSQLSVVHSDHSH 241

Query: 182 XXXXXXXXXXXXXXKPRTSNLVAKLMGLEDMSSKPLLSTSQKQLQREGGLI-QNPIFDID 358
                         K +TSNL+AKLMGLED+ SK +L + QKQL+ E  +  Q P+FDID
Sbjct: 242 STASSSSQTALPK-KEKTSNLIAKLMGLEDIPSKAMLQSPQKQLEMEKNMSPQRPVFDID 300

Query: 359 VQKRRKPQFVGQKMDSGCMTLE 424
           + + R PQ + QK+DS   TL+
Sbjct: 301 MPRLRNPQSIIQKVDSEQRTLK 322


>ref|XP_002324996.1| predicted protein [Populus trichocarpa] gi|222866430|gb|EEF03561.1|
           predicted protein [Populus trichocarpa]
          Length = 899

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/129 (39%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
 Frame = +2

Query: 5   DCYDELREVIRDSLARQNLLPQQSARETAHFERKKMNPYADMPXXXXXXXXXXXXXXXXX 184
           D  DEL++ I DSL R NLLP ++ RE    ER+K +   D+P                 
Sbjct: 185 DYIDELKKAITDSLGRHNLLPNRTTREKTSKERRKRDSAPDVPSTSSSQSSVAQSSSSHS 244

Query: 185 XXXXXXXXXXXXXKPRTSNLVAKLMGLEDMSSKPLLSTSQKQLQREGGLIQ---NPIFDI 355
                        K  + NL+AKLMGLEDM SKPL    QKQL  E  L +    P+FDI
Sbjct: 245 TRSISTAAPPR--KENSPNLIAKLMGLEDMPSKPLQKHPQKQLDVETDLSRRRPRPVFDI 302

Query: 356 DVQKRRKPQ 382
           ++ K RKPQ
Sbjct: 303 EMPKVRKPQ 311


>ref|XP_002280856.2| PREDICTED: uncharacterized protein LOC100250746 [Vitis vinifera]
          Length = 860

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   RDCYDELREVIRDSLARQNLLPQQSARETAHFERKKMNPYADMPXXXXXXXXXXXXXXXX 181
           R+  +EL+ VIRDS ARQNL    +A+E + F R+K++   + P                
Sbjct: 193 RNSTEELKRVIRDSFARQNLTQSIAAQEKSCFNRRKLDSALEFPSASSSQSSLVHSDDTP 252

Query: 182 XXXXXXXXXXXXXXKPRTSNLVAKLMGLEDMSSKPLLSTSQKQLQREGGLIQN---PIFD 352
                         K +  NL+AKLMGLE+  S+   + SQK    EGG   N   P+FD
Sbjct: 253 FADSLSPVDSSK--KTKGPNLIAKLMGLEEFPSEQFQTISQKH--SEGGKTPNQKRPLFD 308

Query: 353 IDVQKRRKPQFVGQKMDSGCMTLE 424
           ID+ K RKPQ   QK+D    TL+
Sbjct: 309 IDMPKVRKPQSAVQKVDLERRTLK 332


>emb|CBI28056.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   RDCYDELREVIRDSLARQNLLPQQSARETAHFERKKMNPYADMPXXXXXXXXXXXXXXXX 181
           R+  +EL+ VIRDS ARQNL    +A+E + F R+K++   + P                
Sbjct: 27  RNSTEELKRVIRDSFARQNLTQSIAAQEKSCFNRRKLDSALEFPSASSSQSSLVHSDDTP 86

Query: 182 XXXXXXXXXXXXXXKPRTSNLVAKLMGLEDMSSKPLLSTSQKQLQREGGLIQN---PIFD 352
                         K +  NL+AKLMGLE+  S+   + SQK    EGG   N   P+FD
Sbjct: 87  FADSLSPVDSSK--KTKGPNLIAKLMGLEEFPSEQFQTISQKH--SEGGKTPNQKRPLFD 142

Query: 353 IDVQKRRKPQFVGQKMDSGCMTLE 424
           ID+ K RKPQ   QK+D    TL+
Sbjct: 143 IDMPKVRKPQSAVQKVDLERRTLK 166


>emb|CAN70392.1| hypothetical protein VITISV_020518 [Vitis vinifera]
          Length = 808

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
 Frame = +2

Query: 2   RDCYDELREVIRDSLARQNLLPQQSARETAHFERKKMNPYADMPXXXXXXXXXXXXXXXX 181
           R+  +EL+ VIRDS ARQNL    +A+E + F R+K++   + P                
Sbjct: 204 RNSTEELKRVIRDSFARQNLTQSIAAQEKSCFNRRKLDSALEFPSASSSQSSLVHSDDTP 263

Query: 182 XXXXXXXXXXXXXXKPRTSNLVAKLMGLEDMSSKPLLSTSQKQLQREGGLI---QNPIFD 352
                         K +  NL+AKLMGLE+  S+   + SQK    EGG     + P+FD
Sbjct: 264 FADSLSPVDSSK--KTKGPNLIAKLMGLEEFPSEQFQTISQK--HSEGGKTPXQKRPLFD 319

Query: 353 IDVQKRRKPQ 382
           ID+ K RKPQ
Sbjct: 320 IDMPKVRKPQ 329


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