BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037804
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22269.3| unnamed protein product [Vitis vinifera]              190   9e-47
ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   190   9e-47
ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   176   1e-42
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40

>emb|CBI22269.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  190 bits (483), Expect = 9e-47
 Identities = 84/113 (74%), Positives = 99/113 (87%)
 Frame = -2

Query: 341 ICNALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEG 162
           + NAL+DMYAKCGSL  AL++F+ M  +D+VSWNAII GLAMHG G +ALQLF +MK EG
Sbjct: 263 VSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEG 322

Query: 161 FVPDKVTFVGVLCACTHGGFVDEGIHYFYNMERDYGVTPEIEHFGCIIDLLGR 3
           FVPDKVTFVGVLCACTH GFVDEG+HYF+ MERDYGV PE+EH+GC++DLLGR
Sbjct: 323 FVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGR 375



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
 Frame = -2

Query: 344 YICNALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKM--- 174
           ++ N+L+D Y K G L  A  +F+ M  RD VSWN I+ G    G    A +LF+KM   
Sbjct: 151 FVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAAFELFEKMPAR 210

Query: 173 -------KQEGFVPDKVTFVGVLCACTHGGFVDEGIHYFYNMER 63
                   + G   D  T + +L AC   G +  G     ++ER
Sbjct: 211 NVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIER 254


>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  190 bits (483), Expect = 9e-47
 Identities = 84/113 (74%), Positives = 99/113 (87%)
 Frame = -2

Query: 341 ICNALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEG 162
           + NAL+DMYAKCGSL  AL++F+ M  +D+VSWNAII GLAMHG G +ALQLF +MK EG
Sbjct: 348 VSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEG 407

Query: 161 FVPDKVTFVGVLCACTHGGFVDEGIHYFYNMERDYGVTPEIEHFGCIIDLLGR 3
           FVPDKVTFVGVLCACTH GFVDEG+HYF+ MERDYGV PE+EH+GC++DLLGR
Sbjct: 408 FVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGR 460



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/85 (30%), Positives = 48/85 (56%)
 Frame = -2

Query: 317 YAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEGFVPDKVTF 138
           Y+K G ++ A  +F++M  ++LV W  +I G A  G  ++A+ L+++M++ G   D  T 
Sbjct: 255 YSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTV 314

Query: 137 VGVLCACTHGGFVDEGIHYFYNMER 63
           + +L AC   G +  G     ++ER
Sbjct: 315 ISILSACAVSGLLGLGKRVHASIER 339


>ref|XP_002305377.1| predicted protein [Populus trichocarpa] gi|222848341|gb|EEE85888.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  179 bits (454), Expect = 2e-43
 Identities = 80/113 (70%), Positives = 94/113 (83%)
 Frame = -2

Query: 341 ICNALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEG 162
           + NALVDMYAKCG ++RAL+VFN M+ +DLVSWN ++ GLAMHG G +ALQLF  M+QEG
Sbjct: 177 VSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEG 236

Query: 161 FVPDKVTFVGVLCACTHGGFVDEGIHYFYNMERDYGVTPEIEHFGCIIDLLGR 3
           F PDKVT V VLCAC H GFVDEGI YF NMERDYG+ P IEH+GC++DLLGR
Sbjct: 237 FRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGR 289



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/91 (31%), Positives = 52/91 (57%)
 Frame = -2

Query: 335 NALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEGFV 156
           + +V  Y K G +  A  +F+RM  ++LVSW  I+ G A+ G  ++A++ F++M++ G  
Sbjct: 78  STMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLK 137

Query: 155 PDKVTFVGVLCACTHGGFVDEGIHYFYNMER 63
           PD  T + +L +C   G +  G     ++ER
Sbjct: 138 PDDGTVISILASCAESGLLGLGKRVHTSIER 168


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  176 bits (447), Expect = 1e-42
 Identities = 75/113 (66%), Positives = 96/113 (84%)
 Frame = -2

Query: 341 ICNALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEG 162
           + NALVDMYAKCG +++AL++FN M+ RDLVSWN ++ GLAMHG G +A+QLF KM+QEG
Sbjct: 354 VSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEG 413

Query: 161 FVPDKVTFVGVLCACTHGGFVDEGIHYFYNMERDYGVTPEIEHFGCIIDLLGR 3
           F PDKVT + +LCACTH GFVD+G+ YF +MERD+G+ P IEH+GC+IDLLGR
Sbjct: 414 FKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGR 466



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/79 (34%), Positives = 44/79 (55%)
 Frame = -2

Query: 335 NALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEGFV 156
           + +V  Y K G +  A  +F++M  ++LV+W  II G A  G  +EA  L+++M+  G  
Sbjct: 255 STMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLK 314

Query: 155 PDKVTFVGVLCACTHGGFV 99
           PD  T + +L AC   G +
Sbjct: 315 PDDGTLISILAACAESGLL 333



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
 Frame = -2

Query: 344 YICNALVDMYAKCGSL--NRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMK 171
           ++ N+L+D Y+KCG L  N A+ +F  M  +DLVSWN++I GL   G    A +LFD+M 
Sbjct: 157 FVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMA 216

Query: 170 QEGFVPDKVTFVGVLCACTHGGFVDEGIHYFYNM 69
           +     D V++  +L      G + +  + F  M
Sbjct: 217 ER----DAVSWNTILDGYVKAGEMSQAFNLFEKM 246


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  169 bits (427), Expect = 3e-40
 Identities = 74/113 (65%), Positives = 94/113 (83%)
 Frame = -2

Query: 341 ICNALVDMYAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEG 162
           I NALVDMYAKCG LN A +VFN + ++D+VSWNA++ GLAMHG G +AL+LF +MK+EG
Sbjct: 352 ISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEG 411

Query: 161 FVPDKVTFVGVLCACTHGGFVDEGIHYFYNMERDYGVTPEIEHFGCIIDLLGR 3
           F P+KVT +GVLCACTH G +D+GI YF  MERDY + PE+EH+GC++DLLGR
Sbjct: 412 FSPNKVTMIGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGR 464



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/76 (36%), Positives = 42/76 (55%)
 Frame = -2

Query: 317 YAKCGSLNRALNVFNRMTSRDLVSWNAIIHGLAMHGSGREALQLFDKMKQEGFVPDKVTF 138
           Y K G +  A  +F++M  ++LVSW  I+ G A  G  REA+ LFD+M++     D  T 
Sbjct: 259 YCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFDQMEKACLKLDNGTV 318

Query: 137 VGVLCACTHGGFVDEG 90
           + +L AC   G +  G
Sbjct: 319 MSILAACAESGLLGLG 334