BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037779
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   120   1e-25
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   117   1e-24
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                117   1e-24
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   116   2e-24
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   116   2e-24

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/110 (50%), Positives = 79/110 (71%)
 Frame = -1

Query: 333  VLYKCISKIMATRLKMVLTDFISPCQSAFLPNRLIGDNILLAQSLCRNYHLSTGHPRCMI 154
            VLYK ISKI+A RLK++L  FI   QSAF+  RL+ +N+LLA  L ++YH  +  PRC +
Sbjct: 834  VLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAM 893

Query: 153  KLDIQKAFDTLNWKFLLRAMQIMNFPLAFLTWVEKCISSVKYSIKVNGAL 4
            K+DI KAFD++ W+FLL  ++ +NFP  F  W++ CIS+  +S++VNG L
Sbjct: 894  KIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGEL 943


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/110 (49%), Positives = 78/110 (70%)
 Frame = -1

Query: 333 VLYKCISKIMATRLKMVLTDFISPCQSAFLPNRLIGDNILLAQSLCRNYHLSTGHPRCMI 154
           VLYK ISKI+A RLK+VL  FI   QSAF+ +RL+ +N+LLA  + ++YH  +   RC +
Sbjct: 425 VLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCAL 484

Query: 153 KLDIQKAFDTLNWKFLLRAMQIMNFPLAFLTWVEKCISSVKYSIKVNGAL 4
           K+DI KAFD++ WKFL+  ++ MNFP  F  W+  CI++  +S++VNG L
Sbjct: 485 KIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGEL 534


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/110 (49%), Positives = 79/110 (71%)
 Frame = -1

Query: 333 VLYKCISKIMATRLKMVLTDFISPCQSAFLPNRLIGDNILLAQSLCRNYHLSTGHPRCMI 154
           V+YK ISKI+A RLK++L  FI   QSAF+  RL+ +N+LLA  L ++YH  +  PRC +
Sbjct: 110 VIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAM 169

Query: 153 KLDIQKAFDTLNWKFLLRAMQIMNFPLAFLTWVEKCISSVKYSIKVNGAL 4
           K+DI KAFD++ W+FLL  ++ +NFP  F  W++ CIS+  +S++VNG L
Sbjct: 170 KIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGEL 219


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/110 (50%), Positives = 77/110 (70%)
 Frame = -1

Query: 333 VLYKCISKIMATRLKMVLTDFISPCQSAFLPNRLIGDNILLAQSLCRNYHLSTGHPRCMI 154
           VLYK ISKI+A RLK+VL  FI+  QSAF+ +RL+ +N+LLA  L ++YH  T   RC I
Sbjct: 537 VLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAI 596

Query: 153 KLDIQKAFDTLNWKFLLRAMQIMNFPLAFLTWVEKCISSVKYSIKVNGAL 4
           K+DI KAFD++ W FL+    I+ FP  F+ W+  CI++  +S++VNG L
Sbjct: 597 KIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGEL 646


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/108 (47%), Positives = 77/108 (71%)
 Frame = -1

Query: 333  VLYKCISKIMATRLKMVLTDFISPCQSAFLPNRLIGDNILLAQSLCRNYHLSTGHPRCMI 154
            VLYK ISK++A RLK +L +FI+P QSAF+ +RL+ +N+LLA  L ++YH     PRC +
Sbjct: 803  VLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDGLSPRCAM 862

Query: 153  KLDIQKAFDTLNWKFLLRAMQIMNFPLAFLTWVEKCISSVKYSIKVNG 10
            K+D+ KAFD++ W FLL  +  ++ P  F+ W+  CIS+  +S++VNG
Sbjct: 863  KIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNG 910