BLASTX nr result

ID: Bupleurum21_contig00037751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037751
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trich...    64   2e-08
ref|XP_002332952.1| cc-nbs-lrr resistance protein [Populus trich...    62   5e-08
ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trich...    60   2e-07
ref|XP_002332954.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
gb|AER13157.1| Rpp4C4 [Phaseolus vulgaris]                             57   2e-06

>ref|XP_002336027.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222838884|gb|EEE77235.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1337

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
 Frame = +3

Query: 54   IQIEAAFQSLIERAEEVKLLYCNDRNVSSIFSN-NREAFVDLRNMYVEGCNTMEYLARIS 230
            IQ+E    +L++  EE+ L   N   V SI ++ + E F  L++++V+ C  ++Y+    
Sbjct: 727  IQLEERVNTLLKITEELHLQELN--GVKSILNDLDEEGFCQLKDLHVQNCPGVQYIINSM 784

Query: 231  E---------------------DKIQHSHPRQTSFCTLTTLGIYGCSAMRYLFSNSVAKC 347
                                  +KI H      S   L  L +  C  ++ LFS S+A+ 
Sbjct: 785  RMGPRTAFLNLDSLFLENLDNLEKICHGQLMAESLGNLRILKVESCHRLKNLFSVSIARR 844

Query: 348  LVQLEKLWVVNCPKMKEIVLYEATSD--EGEIISFPQXXXXXXVGLPRLTS 494
            +V+LE++ +++C  M+E+V  E+ +D  +GE I F Q        LP+ TS
Sbjct: 845  VVRLEEITIIDCKIMEEVVAEESENDTADGEPIEFTQLRRLTLQCLPQFTS 895


>ref|XP_002332952.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834264|gb|EEE72741.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1315

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
 Frame = +3

Query: 54   IQIEAAFQSLIERAEEVKLLYCNDRNVSSIFSN-NREAFVDLRNMYVEGCNTMEYLARIS 230
            IQ+E    +L++  EE+ L   N   V SI ++ + E F  LR+++V+ C  ++Y+    
Sbjct: 727  IQLEEGVNTLLKITEELHLQELN--GVKSILNDLDGEGFPQLRHLHVQNCPGVQYIINSI 784

Query: 231  E---------------------DKIQHSHPRQTSFCTLTTLGIYGCSAMRYLFSNSVAKC 347
                                  +KI H      S   L  L +  C  ++ LFS S+A+ 
Sbjct: 785  RMGPRTAFLNLDSLFLENLDNLEKICHGQLMAESLGNLRILKVESCHRLKNLFSVSMARR 844

Query: 348  LVQLEKLWVVNCPKMKEIVLYEATSD--EGE-IISFPQXXXXXXVGLPRLTS 494
            LV+LE++ +++C  M+E+V  E+ +D  +GE II F Q        LP+ TS
Sbjct: 845  LVRLEEITIIDCKIMEEVVAEESENDAADGEPIIEFTQLRRLTLQCLPQFTS 896



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
 Frame = +3

Query: 69   AFQSLIERAEEV----KLLYCNDRNVSSIFSNNREAFVDLRNMYVEGCNTMEY-LARISE 233
            +F S +E + +     KLL    R+   +  N     + L N  +   N  +  L+ I  
Sbjct: 896  SFHSNVEESSDSQRRQKLLASEARSKEIVAGNELGTSMSLFNTKILFPNLEDLKLSSIKV 955

Query: 234  DKIQHSHPRQTSFCT--LTTLGIYGCSAMRYLFSNSVAKCLVQLEKLWVVNCPKMKEIVL 407
            +KI H  P   S C   L ++ +  C  + YL ++S+ + L QL+KL + NC  M+EIV+
Sbjct: 956  EKIWHDQPSVQSPCVKNLASIAVENCRNLNYLLTSSMVESLAQLKKLEICNCKSMEEIVV 1015

Query: 408  YEATSDEGEIIS---FPQXXXXXXVGLPRLT 491
             E    EG+++S   FP+      + LP+LT
Sbjct: 1016 PEDIG-EGKMMSKMLFPKLLILSLIRLPKLT 1045


>ref|XP_002332949.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222834261|gb|EEE72738.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1340

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
 Frame = +3

Query: 132  VSSIFSNNREAFVDLRNMYVEGCNTMEYLARISEDKIQHSHPRQTSFCTLTTLGIYGCSA 311
            ++SI    R AF++L ++++E  + +E        KI H      S   L  L +  C  
Sbjct: 781  INSIRMGPRTAFLNLDSLFLENLDNLE--------KICHGQLMAESLGKLRILKVESCHR 832

Query: 312  MRYLFSNSVAKCLVQLEKLWVVNCPKMKEIVLYEATSD--EGEIISFPQXXXXXXVGLPR 485
            ++ LFS S+A+ LV+LE++ +++C  M+E+V  E+ +D  +GE I F Q        LP+
Sbjct: 833  LKNLFSVSMARRLVRLEEITIIDCKIMEEVVAEESENDTADGEPIEFAQLRRLTLQCLPQ 892

Query: 486  LTS 494
             TS
Sbjct: 893  FTS 895



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 6/135 (4%)
 Frame = +3

Query: 105  KLLYCNDRNVSSIFSNNREAFVDLRNMYVEGCNTMEY-LARISEDKIQHSHPRQTSFCT- 278
            KLL  + R+   +  N     + L N  +   N  +  L+ I  +KI H  P     C  
Sbjct: 903  KLLASDVRSKEIVAGNELGTSMSLFNTKILFPNLEDLKLSSIKVEKIWHDQPAVQPPCVK 962

Query: 279  -LTTLGIYGCSAMRYLFSNSVAKCLVQLEKLWVVNCPKMKEIVLYEATSDEGEIIS---F 446
             L ++ +  CS + YL ++S+ + L QLE+L + NC  M+EIV+ E    EG+++S   F
Sbjct: 963  NLASMVVESCSNLNYLLTSSMVESLAQLERLEICNCESMEEIVVPEGIG-EGKMMSKMLF 1021

Query: 447  PQXXXXXXVGLPRLT 491
            P+       GLP+LT
Sbjct: 1022 PKLHLLELSGLPKLT 1036


>ref|XP_002332954.1| predicted protein [Populus trichocarpa] gi|222834266|gb|EEE72743.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
 Frame = +3

Query: 69  AFQSLIERAEEV----KLLYCNDRNVSSIFSNNREAFVDLRNMYVEGCNTMEY-LARISE 233
           +F S +E + +     KLL    R+   +  N     V L N  +   N  +  L+ I  
Sbjct: 55  SFHSNVEESSDSQRRQKLLASEARSKEIVAGNELGTSVSLFNTKILFPNLEDLKLSSIKV 114

Query: 234 DKIQHSHPRQTSFCT--LTTLGIYGCSAMRYLFSNSVAKCLVQLEKLWVVNCPKMKEIVL 407
           +KI H  P   + C   L ++ +  CS + Y+ ++S+ + L QL++L + NC  M+EIV+
Sbjct: 115 EKIWHDQPAVQAPCVKNLASIAVENCSNLNYIVASSMVESLAQLKRLEICNCKSMEEIVV 174

Query: 408 YEATSDEGEIIS---FPQXXXXXXVGLPRLT 491
            E    EG+++S   FP+      + LP+LT
Sbjct: 175 PEGIG-EGKMMSKMLFPKLHILSLIRLPKLT 204


>gb|AER13157.1| Rpp4C4 [Phaseolus vulgaris]
          Length = 2629

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/84 (41%), Positives = 44/84 (52%)
 Frame = +3

Query: 237  KIQHSHPRQTSFCTLTTLGIYGCSAMRYLFSNSVAKCLVQLEKLWVVNCPKMKEIVLYEA 416
            ++Q+  P   SF +L  L +  C  M+YLF  S AK LVQLE L V+NC  +KEI   E 
Sbjct: 2528 RLQNLVPNSVSFISLKQLCVKLCKKMKYLFKFSTAKSLVQLESLIVMNCKSLKEIAKKED 2587

Query: 417  TSDEGEIISFPQXXXXXXVGLPRL 488
              DE   I F Q        LP+L
Sbjct: 2588 NDDE---IIFGQLTTLRLDSLPKL 2608


Top