BLASTX nr result

ID: Bupleurum21_contig00037732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037732
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [P...   223   2e-56
ref|XP_002298380.1| beta-ketoacyl-coa synthase family protein [P...   217   9e-55
gb|ABK95107.1| unknown [Populus trichocarpa]                          217   9e-55
ref|XP_004157020.1| PREDICTED: LOW QUALITY PROTEIN: 3-ketoacyl-C...   214   6e-54
ref|XP_004148222.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [...   214   6e-54

>ref|XP_002313455.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa]
           gi|222849863|gb|EEE87410.1| beta-ketoacyl-coa synthase
           family protein [Populus trichocarpa]
          Length = 461

 Score =  223 bits (567), Expect = 2e-56
 Identities = 105/146 (71%), Positives = 125/146 (85%), Gaps = 2/146 (1%)
 Frame = +3

Query: 15  RVGFHLGKNLPKSATRALIDNLKQISPRILPIRELLRFAIVSFVYKMXXXXXXXXXA--R 188
           R+GFHLGK+LPK+ATRAL+DNL++I+P+ILP+RELLRF +VSF+ K             +
Sbjct: 267 RLGFHLGKSLPKAATRALVDNLREITPKILPVRELLRFMVVSFIRKYWSHRSTKGVVSPK 326

Query: 189 PLVNFKSGVDHFCIHTGGKAVINGIGQSLGLTDYDLEPARMTLHRFGNTSASSLWYVLGY 368
           P++NFK+GVDHFCIHTGGKAVI+GIG +L LT+YDLEPARMTLHRFGNTSASSLWYVLGY
Sbjct: 327 PVINFKTGVDHFCIHTGGKAVIDGIGVNLDLTEYDLEPARMTLHRFGNTSASSLWYVLGY 386

Query: 369 MEAKKRFKKGDRVFMICFGGGFKCNS 446
           MEAKKR K+GDRV M+ FG GFKCNS
Sbjct: 387 MEAKKRLKRGDRVLMMSFGAGFKCNS 412


>ref|XP_002298380.1| beta-ketoacyl-coa synthase family protein [Populus trichocarpa]
           gi|222845638|gb|EEE83185.1| beta-ketoacyl-coa synthase
           family protein [Populus trichocarpa]
          Length = 467

 Score =  217 bits (552), Expect = 9e-55
 Identities = 105/147 (71%), Positives = 121/147 (82%), Gaps = 3/147 (2%)
 Frame = +3

Query: 15  RVGFHLGKNLPKSATRALIDNLKQISPRILPIRELLRFAIVSFVYKMXXXXXXXXXA--- 185
           R GFHL K+LPK ATRAL+DNL++I+P+ILP+RELLRF +VSF+ K              
Sbjct: 267 RSGFHLDKSLPKVATRALVDNLREITPKILPVRELLRFMVVSFIRKYWSHRSTKGAGSSP 326

Query: 186 RPLVNFKSGVDHFCIHTGGKAVINGIGQSLGLTDYDLEPARMTLHRFGNTSASSLWYVLG 365
           +P +NFK+GVDHFCIHTGGKAVI+GIG SL LT++DLEPARMTLHRFGNTSASSLWYVLG
Sbjct: 327 KPAINFKTGVDHFCIHTGGKAVIDGIGVSLDLTEHDLEPARMTLHRFGNTSASSLWYVLG 386

Query: 366 YMEAKKRFKKGDRVFMICFGGGFKCNS 446
           YMEAK+R KKGDRV MI FG GFKCNS
Sbjct: 387 YMEAKRRLKKGDRVLMISFGAGFKCNS 413


>gb|ABK95107.1| unknown [Populus trichocarpa]
          Length = 450

 Score =  217 bits (552), Expect = 9e-55
 Identities = 105/147 (71%), Positives = 121/147 (82%), Gaps = 3/147 (2%)
 Frame = +3

Query: 15  RVGFHLGKNLPKSATRALIDNLKQISPRILPIRELLRFAIVSFVYKMXXXXXXXXXA--- 185
           R GFHL K+LPK ATRAL+DNL++I+P+ILP+RELLRF +VSF+ K              
Sbjct: 250 RSGFHLDKSLPKVATRALVDNLREITPKILPVRELLRFMVVSFIRKYWSHRSTKGAGSSP 309

Query: 186 RPLVNFKSGVDHFCIHTGGKAVINGIGQSLGLTDYDLEPARMTLHRFGNTSASSLWYVLG 365
           +P +NFK+GVDHFCIHTGGKAVI+GIG SL LT++DLEPARMTLHRFGNTSASSLWYVLG
Sbjct: 310 KPAINFKTGVDHFCIHTGGKAVIDGIGVSLDLTEHDLEPARMTLHRFGNTSASSLWYVLG 369

Query: 366 YMEAKKRFKKGDRVFMICFGGGFKCNS 446
           YMEAK+R KKGDRV MI FG GFKCNS
Sbjct: 370 YMEAKRRLKKGDRVLMISFGAGFKCNS 396


>ref|XP_004157020.1| PREDICTED: LOW QUALITY PROTEIN: 3-ketoacyl-CoA synthase 12-like
           [Cucumis sativus]
          Length = 461

 Score =  214 bits (545), Expect = 6e-54
 Identities = 105/143 (73%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
 Frame = +3

Query: 21  GFHLGKNLPKSATRALIDNLKQISPRILPIRELLRFAIVSFVYKMXXXXXXXXXARP-LV 197
           GFHLGKNLPK+ATRA +DNL++I+PRILP RELL+F I+S V K+         A+   V
Sbjct: 269 GFHLGKNLPKAATRAFVDNLREIAPRILPARELLQFLILSLVKKLNTNPKQGSGAKTSAV 328

Query: 198 NFKSGVDHFCIHTGGKAVINGIGQSLGLTDYDLEPARMTLHRFGNTSASSLWYVLGYMEA 377
           NFK+GVDHFCIHTGGKAVI+GIG SLGL  YDLEPARMTLHRFGNTSASSLWYVL YMEA
Sbjct: 329 NFKTGVDHFCIHTGGKAVIDGIGLSLGLEKYDLEPARMTLHRFGNTSASSLWYVLAYMEA 388

Query: 378 KKRFKKGDRVFMICFGGGFKCNS 446
           KKR KKG+R+ MI FG GFKCNS
Sbjct: 389 KKRLKKGERILMISFGAGFKCNS 411


>ref|XP_004148222.1| PREDICTED: 3-ketoacyl-CoA synthase 12-like [Cucumis sativus]
          Length = 461

 Score =  214 bits (545), Expect = 6e-54
 Identities = 105/143 (73%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
 Frame = +3

Query: 21  GFHLGKNLPKSATRALIDNLKQISPRILPIRELLRFAIVSFVYKMXXXXXXXXXARP-LV 197
           GFHLGKNLPK+ATRA +DNL++I+PRILP RELL+F I+S V K+         A+   V
Sbjct: 269 GFHLGKNLPKAATRAFVDNLREIAPRILPARELLQFLILSLVKKLNTNPKQGSGAKTSAV 328

Query: 198 NFKSGVDHFCIHTGGKAVINGIGQSLGLTDYDLEPARMTLHRFGNTSASSLWYVLGYMEA 377
           NFK+GVDHFCIHTGGKAVI+GIG SLGL  YDLEPARMTLHRFGNTSASSLWYVL YMEA
Sbjct: 329 NFKTGVDHFCIHTGGKAVIDGIGLSLGLEKYDLEPARMTLHRFGNTSASSLWYVLAYMEA 388

Query: 378 KKRFKKGDRVFMICFGGGFKCNS 446
           KKR KKG+R+ MI FG GFKCNS
Sbjct: 389 KKRLKKGERILMISFGAGFKCNS 411


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