BLASTX nr result

ID: Bupleurum21_contig00037714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037714
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease...   115   5e-24
emb|CBI21872.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus c...   108   4e-22
emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]   103   1e-20
emb|CBK00919.1| POP1 protein [Arabidopsis thaliana]                   102   4e-20

>ref|XP_003633267.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleases P/MRP protein subunit
           POP1-like [Vitis vinifera]
          Length = 745

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
 Frame = -2

Query: 339 KVWGFYLPLGLHXXXXXXXSIMKSLTDGVVVHDASYCSVVQLDGSEEKLLSILGTVLEPS 160
           K+WGFYLP+GL        +++K    G +VHDA Y   +QL+G E+ LLSIL  VL PS
Sbjct: 134 KLWGFYLPVGLQGRGRGSRALLKWFRHGALVHDACYHIALQLEGPEDSLLSILSMVLVPS 193

Query: 159 VD-DSEDISRKVLSGAACGSAMLHHAGAPCSHTIAPVTYVWRTPEQPEV 16
               SEDISR VLSGAA G AMLHH GAP S +IAPVTY+WR  E+ ++
Sbjct: 194 PSAHSEDISRSVLSGAAYGRAMLHHVGAPGSKSIAPVTYMWRPIEKKDI 242


>emb|CBI21872.3| unnamed protein product [Vitis vinifera]
          Length = 806

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
 Frame = -2

Query: 339 KVWGFYLPLGLHXXXXXXXSIMKSLTDGVVVHDASYCSVVQLDGSEEKLLSILGTVLEPS 160
           K+WGFYLP+GL        +++K    G +VHDA Y   +QL+G E+ LLSIL  VL PS
Sbjct: 134 KLWGFYLPVGLQGRGRGSRALLKWFRHGALVHDACYHIALQLEGPEDSLLSILSMVLVPS 193

Query: 159 VD-DSEDISRKVLSGAACGSAMLHHAGAPCSHTIAPVTYVWRTPEQPEV 16
               SEDISR VLSGAA G AMLHH GAP S +IAPVTY+WR  E+ ++
Sbjct: 194 PSAHSEDISRSVLSGAAYGRAMLHHVGAPGSKSIAPVTYMWRPIEKKDI 242


>ref|XP_002515263.1| hypothetical protein RCOM_1346560 [Ricinus communis]
           gi|223545743|gb|EEF47247.1| hypothetical protein
           RCOM_1346560 [Ricinus communis]
          Length = 838

 Score =  108 bits (271), Expect = 4e-22
 Identities = 56/102 (54%), Positives = 69/102 (67%), Gaps = 1/102 (0%)
 Frame = -2

Query: 339 KVWGFYLPLGLHXXXXXXXSIMKSLTDGVVVHDASYCSVVQLDGSEEKLLSILGTVLEPS 160
           K+WGF+LPLGL        +++K    G V+HDASY S VQL+  E+ L+S+L  VLEPS
Sbjct: 136 KLWGFHLPLGLQGRGRGSRALLKWYKHGAVLHDASYYSAVQLEAPEDSLMSVLKMVLEPS 195

Query: 159 VD-DSEDISRKVLSGAACGSAMLHHAGAPCSHTIAPVTYVWR 37
               SE+I   VLSG+  GSAMLHH GAP S  IAPVTY+WR
Sbjct: 196 PSAQSEEIINAVLSGSIYGSAMLHHIGAPISQLIAPVTYMWR 237


>emb|CAN79216.1| hypothetical protein VITISV_012793 [Vitis vinifera]
          Length = 743

 Score =  103 bits (258), Expect = 1e-20
 Identities = 57/109 (52%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
 Frame = -2

Query: 339 KVWGFYLPLGLHXXXXXXXSIMKSLTDGVVVHDASYCSVVQLDGSEEKLLSILGTVLEPS 160
           K+WGFYLP+GL                G +VHDA Y   + L+G E+ LLSIL  VL PS
Sbjct: 134 KLWGFYLPVGLQGRH------------GALVHDACYHIALXLEGPEDSLLSILSMVLVPS 181

Query: 159 VD-DSEDISRKVLSGAACGSAMLHHAGAPCSHTIAPVTYVWRTPEQPEV 16
               SEDISR VLSGAA G AMLHH GAP S +IAPVTY+WR  ++ ++
Sbjct: 182 PSAHSEDISRSVLSGAAYGXAMLHHVGAPGSKSIAPVTYMWRPIZKKDI 230


>emb|CBK00919.1| POP1 protein [Arabidopsis thaliana]
          Length = 307

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
 Frame = -2

Query: 339 KVWGFYLPLGLHXXXXXXXSIMKSLTDGVVVHDASYCSVVQLDGSEEKLLSILGTVLEPS 160
           K+WGF+LPLGLH        ++K    GV+VHDASY   VQL+G E  LLSIL  +LEPS
Sbjct: 138 KLWGFHLPLGLHGRGRGSRDVLKQSRQGVLVHDASYHIAVQLEGPEGSLLSILNMLLEPS 197

Query: 159 VDD-SEDISRKVLSGAACGSAMLHHAGAPCSHTIAPVTYVWRTPEQPEVNEMDK 1
               S+++   +L+G +  +AML+H   P S  IAPVTY+WR  + P+    +K
Sbjct: 198 PSSHSKEVFDSILTGGSYENAMLYHVEPPVSQAIAPVTYMWRPSKIPKRRNEEK 251


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