BLASTX nr result

ID: Bupleurum21_contig00037704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037704
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523525.1| protein with unknown function [Ricinus commu...   102   4e-20
emb|CBI25615.3| unnamed protein product [Vitis vinifera]              100   9e-20
ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l...   100   9e-20
ref|XP_003549698.1| PREDICTED: WD repeat-containing protein 76-l...    99   3e-19
ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19

>ref|XP_002523525.1| protein with unknown function [Ricinus communis]
           gi|223537232|gb|EEF38864.1| protein with unknown
           function [Ricinus communis]
          Length = 530

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +2

Query: 41  RAIWGWDDSYVFVGNMRRGVDVISTAEKRCINTLFSQEMTAIPCRFDVHPHKVGMLAGDT 220
           RAIWGWDDSY+F+GNM+RGVD+IS  ++R I TL S  M+AIPCRFD HP+ VGMLAG T
Sbjct: 460 RAIWGWDDSYIFIGNMKRGVDIISRPQRRAILTLQSPHMSAIPCRFDAHPYNVGMLAGAT 519

Query: 221 NGG 229
           +GG
Sbjct: 520 SGG 522


>emb|CBI25615.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +2

Query: 41  RAIWGWDDSYVFVGNMRRGVDVISTAEKRCINTLFSQEMTAIPCRFDVHPHKVGMLAGDT 220
           RAIWGWDDSY+F+GNM+RGVD+ISTA ++ + TL S  M+AIPCRF  HP+KVGMLAG T
Sbjct: 380 RAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVGMLAGAT 439

Query: 221 NGG 229
            GG
Sbjct: 440 GGG 442


>ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera]
          Length = 489

 Score =  100 bits (250), Expect = 9e-20
 Identities = 44/63 (69%), Positives = 53/63 (84%)
 Frame = +2

Query: 41  RAIWGWDDSYVFVGNMRRGVDVISTAEKRCINTLFSQEMTAIPCRFDVHPHKVGMLAGDT 220
           RAIWGWDDSY+F+GNM+RGVD+ISTA ++ + TL S  M+AIPCRF  HP+KVGMLAG T
Sbjct: 419 RAIWGWDDSYLFIGNMKRGVDIISTACRKTVMTLQSAHMSAIPCRFSAHPYKVGMLAGAT 478

Query: 221 NGG 229
            GG
Sbjct: 479 GGG 481


>ref|XP_003549698.1| PREDICTED: WD repeat-containing protein 76-like [Glycine max]
          Length = 460

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/63 (68%), Positives = 54/63 (85%)
 Frame = +2

Query: 41  RAIWGWDDSYVFVGNMRRGVDVISTAEKRCINTLFSQEMTAIPCRFDVHPHKVGMLAGDT 220
           RA WGWDDSY+FVGNM+RGVDV+S+ E++ + TL SQ M+AIPCRFD H ++VGMLAG T
Sbjct: 390 RAKWGWDDSYLFVGNMKRGVDVVSSVERKIVMTLESQHMSAIPCRFDTHSYEVGMLAGAT 449

Query: 221 NGG 229
           +GG
Sbjct: 450 SGG 452


>ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/63 (69%), Positives = 51/63 (80%)
 Frame = +2

Query: 41  RAIWGWDDSYVFVGNMRRGVDVISTAEKRCINTLFSQEMTAIPCRFDVHPHKVGMLAGDT 220
           RA WGWDDS+V+VGNM+RGVD+IS A++R I TL S  MTAIPCRF  HP +VGMLAG T
Sbjct: 443 RATWGWDDSFVYVGNMKRGVDIISPAQRRVIRTLQSPHMTAIPCRFHAHPFRVGMLAGAT 502

Query: 221 NGG 229
            GG
Sbjct: 503 GGG 505


Top