BLASTX nr result

ID: Bupleurum21_contig00037697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037697
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256...   258   5e-67
emb|CBI20745.3| unnamed protein product [Vitis vinifera]              258   5e-67
ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|2...   244   6e-63
ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, put...   240   1e-61
ref|XP_004157409.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   234   8e-60

>ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
          Length = 842

 Score =  258 bits (659), Expect = 5e-67
 Identities = 128/197 (64%), Positives = 149/197 (75%), Gaps = 2/197 (1%)
 Frame = -2

Query: 587  ALSNLRKENTKAIDTAARPT-TVADDSSKLAANKLITDYFPGSVAHFRSRNS-TPREKNE 414
            ALS LRK++T  ++  A  +    D++SKLAANKLITDYFPGSV   RSR   +  E+  
Sbjct: 424  ALSELRKQSTHGVEIEADASKATVDETSKLAANKLITDYFPGSVTD-RSRGCISSGERKA 482

Query: 413  VEXXXXXXXXXXXXXXXNVRKEKLRDIPVWCCIPETPFQVDAFKYLRRSCSHWFLTHFHL 234
             E               + R  KLRD+P+WCCIP TPF+VDAF+YLRR CSHWFLTHFHL
Sbjct: 483  AEKIQLGSSRKQVVVKNHARSGKLRDLPLWCCIPGTPFRVDAFRYLRRDCSHWFLTHFHL 542

Query: 233  DHYQGLTRSFSHGKIYCSSITAKLVNLKIGISWDDIQILPLNQKISIAGIDVTCFDANHC 54
            DHYQGLTRSF HGKIYCS+ITA+LVN+KIGI WD +QILPLNQKI+I G+DVTC DANHC
Sbjct: 543  DHYQGLTRSFCHGKIYCSAITARLVNMKIGIPWDRLQILPLNQKINIDGVDVTCLDANHC 602

Query: 53   PGSIIILFEPPSGKAVL 3
            PGSIIILFEP +GKAVL
Sbjct: 603  PGSIIILFEPSNGKAVL 619


>emb|CBI20745.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  258 bits (659), Expect = 5e-67
 Identities = 128/197 (64%), Positives = 149/197 (75%), Gaps = 2/197 (1%)
 Frame = -2

Query: 587 ALSNLRKENTKAIDTAARPT-TVADDSSKLAANKLITDYFPGSVAHFRSRNS-TPREKNE 414
           ALS LRK++T  ++  A  +    D++SKLAANKLITDYFPGSV   RSR   +  E+  
Sbjct: 305 ALSELRKQSTHGVEIEADASKATVDETSKLAANKLITDYFPGSVTD-RSRGCISSGERKA 363

Query: 413 VEXXXXXXXXXXXXXXXNVRKEKLRDIPVWCCIPETPFQVDAFKYLRRSCSHWFLTHFHL 234
            E               + R  KLRD+P+WCCIP TPF+VDAF+YLRR CSHWFLTHFHL
Sbjct: 364 AEKIQLGSSRKQVVVKNHARSGKLRDLPLWCCIPGTPFRVDAFRYLRRDCSHWFLTHFHL 423

Query: 233 DHYQGLTRSFSHGKIYCSSITAKLVNLKIGISWDDIQILPLNQKISIAGIDVTCFDANHC 54
           DHYQGLTRSF HGKIYCS+ITA+LVN+KIGI WD +QILPLNQKI+I G+DVTC DANHC
Sbjct: 424 DHYQGLTRSFCHGKIYCSAITARLVNMKIGIPWDRLQILPLNQKINIDGVDVTCLDANHC 483

Query: 53  PGSIIILFEPPSGKAVL 3
           PGSIIILFEP +GKAVL
Sbjct: 484 PGSIIILFEPSNGKAVL 500


>ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|222855429|gb|EEE92976.1|
           predicted protein [Populus trichocarpa]
          Length = 740

 Score =  244 bits (624), Expect = 6e-63
 Identities = 125/219 (57%), Positives = 143/219 (65%), Gaps = 21/219 (9%)
 Frame = -2

Query: 596 IMHALSNLRKENTKAIDT---------------------AARPTTVADDSSKLAANKLIT 480
           I+HALS LRK +  AI+                            + DD+SK  ANKLIT
Sbjct: 300 IVHALSELRKGSNHAIEAHGDAHAFGEVGSRRSHGAEMQVEASKIIGDDTSKPTANKLIT 359

Query: 479 DYFPGSVAHFRSRNSTPREKNEVEXXXXXXXXXXXXXXXNVRKEKLRDIPVWCCIPETPF 300
           DYFPGSV   +  +   +E+   E                 +K K +DIP+WC IP TPF
Sbjct: 360 DYFPGSVPIKKKTSVISKEQRGAEKSQPGYVRKQGVKNY-TKKGKFKDIPLWCSIPGTPF 418

Query: 299 QVDAFKYLRRSCSHWFLTHFHLDHYQGLTRSFSHGKIYCSSITAKLVNLKIGISWDDIQI 120
           +VDAFKYLR  CSHWFLTHFH+DHYQGLTRSF HGKIYCS ITAKLVNLKIGI WD + +
Sbjct: 419 RVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITAKLVNLKIGIPWDSLHV 478

Query: 119 LPLNQKISIAGIDVTCFDANHCPGSIIILFEPPSGKAVL 3
           LPLNQKI IAG+DVTC DANHCPGSIIILFEPP+GKAVL
Sbjct: 479 LPLNQKICIAGVDVTCLDANHCPGSIIILFEPPNGKAVL 517


>ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223544650|gb|EEF46166.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 737

 Score =  240 bits (613), Expect = 1e-61
 Identities = 125/221 (56%), Positives = 146/221 (66%), Gaps = 23/221 (10%)
 Frame = -2

Query: 596 IMHALSNLRKENTKAIDTAARPTTVAD---------------------DSSKLAANKLIT 480
           I+HAL+ LRK      +T   P   AD                     ++SK  ANKLIT
Sbjct: 294 IVHALAELRKGCNLVDETHRDPNASADVGSLSTHAAEMQMEASKVSGDETSKQTANKLIT 353

Query: 479 DYFPGSVA-HFRSRN-STPREKNEVEXXXXXXXXXXXXXXXNVRKEKLRDIPVWCCIPET 306
           DYFPGSV+   R +  S  +EK                    V+  KL+DIP+WC IP T
Sbjct: 354 DYFPGSVSVTVREKGCSIAKEKRGPAKNRPDSVHKRMAKNHPVKNGKLKDIPLWCSIPGT 413

Query: 305 PFQVDAFKYLRRSCSHWFLTHFHLDHYQGLTRSFSHGKIYCSSITAKLVNLKIGISWDDI 126
           PF+VDAFKYLR  CSHWFLTHFH+DHYQGLTRSF HGKIYCS ITA+LVN+KIGI WD +
Sbjct: 414 PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITARLVNMKIGIPWDRL 473

Query: 125 QILPLNQKISIAGIDVTCFDANHCPGSIIILFEPPSGKAVL 3
           Q+LPLN+KISIAG+DVTC DANHCPGSII+LFEPP+GKAVL
Sbjct: 474 QVLPLNKKISIAGVDVTCLDANHCPGSIIVLFEPPNGKAVL 514


>ref|XP_004157409.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101218609
           [Cucumis sativus]
          Length = 774

 Score =  234 bits (597), Expect = 8e-60
 Identities = 117/214 (54%), Positives = 146/214 (68%), Gaps = 16/214 (7%)
 Frame = -2

Query: 596 IMHALSNLRKE--------NTKAIDTAARPTTVADD--------SSKLAANKLITDYFPG 465
           I HALS LRKE        N++A  +  + +    D        ++K   NKLITDYFPG
Sbjct: 337 ITHALSELRKESSLVETSTNSRAYSSTGQQSNNGSDGREGSTNGTNKTPPNKLITDYFPG 396

Query: 464 SVAHFRSRNSTPREKNEVEXXXXXXXXXXXXXXXNVRKEKLRDIPVWCCIPETPFQVDAF 285
              + ++  S+   + +V                NVR  KL ++PVW CIP TPF+VDAF
Sbjct: 397 FATNXKNPCSSSSVQKDVGKKIPDSLNKGKTAKRNVRNRKLGNVPVWSCIPGTPFRVDAF 456

Query: 284 KYLRRSCSHWFLTHFHLDHYQGLTRSFSHGKIYCSSITAKLVNLKIGISWDDIQILPLNQ 105
           ++LR  C HWFLTHFH+DHYQGLT+SF HG IYCS+ITAKLVN+KIGI W+ +Q+LPL+Q
Sbjct: 457 RHLRGDCFHWFLTHFHMDHYQGLTKSFCHGMIYCSTITAKLVNMKIGIPWERLQVLPLDQ 516

Query: 104 KISIAGIDVTCFDANHCPGSIIILFEPPSGKAVL 3
           KI+IAG+DVTCFDANHCPGSIIILFEPP+GKAVL
Sbjct: 517 KINIAGVDVTCFDANHCPGSIIILFEPPNGKAVL 550


Top