BLASTX nr result

ID: Bupleurum21_contig00037693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037693
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323456.1| glycosyl transferase [Populus trichocarpa] g...    73   2e-11
emb|CAI93178.1| glycosyltransferase [Populus balsamifera]              73   2e-11
gb|AAX33319.1| secondary cell wall-related glycosyltransferase f...    72   6e-11
gb|ABP65661.1| secondary wall-associated glycosyltransferase fam...    72   6e-11
ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa] g...    68   9e-10

>ref|XP_002323456.1| glycosyl transferase [Populus trichocarpa]
           gi|222868086|gb|EEF05217.1| glycosyl transferase
           [Populus trichocarpa] gi|333951813|gb|AEG25424.1|
           glycosyltransferase GT43B [Populus trichocarpa]
          Length = 357

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
 Frame = -1

Query: 298 SMERSKKKFLLWKKSTVHFLLCFVVGFLTGFIPTSDKS-WTSFGQVLASTQSESSLRPLE 122
           S+ERSK++  LWKK+ VHF LCFV+GF TGF P    S +TS   V AS +S+S  +P+E
Sbjct: 3   SVERSKRRVQLWKKAIVHFGLCFVMGFFTGFAPAGKASIFTS--HVAASNKSQSLPQPVE 60

Query: 121 ISSHH---------TLNRSLLDGTHLTAQLQSNESVHTETIKKEQ 14
           ++ H           +NRSL+  T + A   S ES H   + KE+
Sbjct: 61  MTLHQQAASTPHASNVNRSLIAETAVPAPPSSKESEHATFLGKEE 105


>emb|CAI93178.1| glycosyltransferase [Populus balsamifera]
          Length = 363

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
 Frame = -1

Query: 298 SMERSKKKFLLWKKSTVHFLLCFVVGFLTGFIPTSDKS-WTSFGQVLASTQSESSLRPLE 122
           S+ERSK++  LWKK+ VHF LCFV+GF TGF P    S +TS   V AS +S+S  +P+E
Sbjct: 3   SVERSKRRVQLWKKAIVHFGLCFVMGFFTGFAPAGKASIFTS--HVAASNKSQSLPQPVE 60

Query: 121 ISSHH---------TLNRSLLDGTHLTAQLQSNESVHTETIKKEQ 14
           ++ H           +NRSL+  T + A   S ES H   + KE+
Sbjct: 61  MTLHQQAASTPHASNVNRSLIAETAVPAPPSSKESEHATFLGKEE 105


>gb|AAX33319.1| secondary cell wall-related glycosyltransferase family 43 [Populus
           tremula x Populus tremuloides]
          Length = 356

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
 Frame = -1

Query: 298 SMERSKKKFLLWKKSTVHFLLCFVVGFLTGFIPTSDKS-WTSFGQVLASTQSESSLRPLE 122
           S+ERSK++  LWKK+ VHF LCFV+GF TGF P    S +TS   V AS +S+S  +P+E
Sbjct: 3   SVERSKRRVQLWKKAIVHFGLCFVMGFFTGFAPAGKASIFTS--HVAASNKSQSLPQPVE 60

Query: 121 I------SSHH--TLNRSLLDGTHLTAQLQSNESVHTETIKKEQ 14
           +      S+ H   +NRSL+  T + A   S ES H   ++KE+
Sbjct: 61  MLHQQAASAPHASNVNRSLIAETAVPAPPSSKESDHATFLEKEE 104


>gb|ABP65661.1| secondary wall-associated glycosyltransferase family 43B [Populus
           tremula x Populus alba]
          Length = 356

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
 Frame = -1

Query: 298 SMERSKKKFLLWKKSTVHFLLCFVVGFLTGFIPTSDKS-WTSFGQVLASTQSESSLRPLE 122
           S+ERSK++  LWKK+ VHF LCFV+GF TGF P    S +TS   V AS +S+S  +P+E
Sbjct: 3   SVERSKRRVQLWKKAIVHFGLCFVMGFFTGFAPAGKASIFTS--HVAASNKSQSLPQPVE 60

Query: 121 I------SSHH--TLNRSLLDGTHLTAQLQSNESVHTETIKKEQ 14
           +      S+ H   +NRSL+  T + A   S ES H   ++KE+
Sbjct: 61  MLHQQAASAPHASNVNRSLIAETAVPAPPSSKESDHATFLEKEE 104


>ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa]
           gi|222833530|gb|EEE72007.1| glycosyl transferase
           [Populus trichocarpa] gi|333951811|gb|AEG25423.1|
           glycosyltransferase GT43A [Populus trichocarpa]
          Length = 359

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
 Frame = -1

Query: 298 SMERSKKKFLLWKKSTVHFLLCFVVGFLTGFIPTSDKSWTSFGQVLASTQSE--SSLRPL 125
           S+ERSKKK  LWKK+ VHF LCFV+GF TGF P    S  S   V+AS +S+    L   
Sbjct: 3   SLERSKKKVQLWKKAIVHFGLCFVMGFFTGFAPGGKASIFS-SHVVASNKSQPVEMLHQQ 61

Query: 124 EISSHH--TLNRSLLDGTHLTAQLQSNESVHTETIKKEQD 11
             S+ H   +NRSL+  + +   L S ES   + ++KE++
Sbjct: 62  VASTPHASNVNRSLIAESPVPTPLSSKESEPAKFLEKEEE 101


Top