BLASTX nr result

ID: Bupleurum21_contig00037689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037689
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...   111   7e-23
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002328106.1| f-box family protein [Populus trichocarpa] g...   106   2e-21
ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_002523850.1| conserved hypothetical protein [Ricinus comm...    94   9e-18

>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score =  111 bits (277), Expect = 7e-23
 Identities = 67/136 (49%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
 Frame = +2

Query: 5   DKKCMLELEKKLTLSWIIIDPNAKRALNLSSLRPVSVRLCWDGSDIEVIYATIL---RDS 175
           D K +  LE  LTLSWI+IDP  KRA NLSSLRPVSV+  W   +++V YAT++   R  
Sbjct: 166 DYKWLSHLEDTLTLSWILIDPTRKRAANLSSLRPVSVKRHWLTGEVQVRYATVVGGDRTV 225

Query: 176 LSEFVECRVVATFVCNDEEEKGYLEMREVSLFMEDMGMMRLNGEKSLRILEEAMVCGERK 355
            SE V+C +V T      +E G +++REV+L +EDM    LNG++SL IL+EA+  G RK
Sbjct: 226 GSEVVQCGIVVTCA---GKEGGEMQVREVNLQVEDMEGRHLNGKESLVILQEALENGRRK 282

Query: 356 KANGGEEKKEMYVKYM 403
           KA  GEE K  Y +Y+
Sbjct: 283 KAK-GEEGKARYERYL 297


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  108 bits (269), Expect = 6e-22
 Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
 Frame = +2

Query: 23  ELEKKLTLSWIIIDPNAKRALNLSSLRPVSVRLCWDGSDIEVIYATILRDS--LSEFVEC 196
           +LE+ +TLSWI+IDP  +RA+NLSS RPVSV+  W   ++ V ++ I+       E+VEC
Sbjct: 180 QLEENITLSWILIDPKGRRAMNLSSERPVSVQRHWLTGEVVVKFSNIMAGDGREKEYVEC 239

Query: 197 RVVATFVCNDEEEKGYLEMREVSLFMEDMGMMRLNGEKSLRILEEAMVCGERKKANGGEE 376
            V+   VC  E+E G +E+REVS+ MEDM    L G+  L IL+EAM  GER+K  GG+E
Sbjct: 240 GVM---VCCGEKEGGEVEVREVSMVMEDMEGKNLTGKDGLVILQEAMERGERRKGKGGKE 296

Query: 377 KKEMYVKYM 403
            K  Y +++
Sbjct: 297 GKGRYEEFV 305


>ref|XP_002328106.1| f-box family protein [Populus trichocarpa]
           gi|222837621|gb|EEE75986.1| f-box family protein
           [Populus trichocarpa]
          Length = 342

 Score =  106 bits (264), Expect = 2e-21
 Identities = 59/129 (45%), Positives = 86/129 (66%), Gaps = 2/129 (1%)
 Frame = +2

Query: 23  ELEKKLTLSWIIIDPNAKRALNLSSLRPVSVRLCWDGSDIEVIYATILR--DSLSEFVEC 196
           +LE+ +TLSWI+IDP  +RA+NLSS RPVSV+  W   ++ V +ATI+       EFVEC
Sbjct: 178 QLEENMTLSWILIDPKRRRAMNLSSGRPVSVQRHWLTGEVVVKFATIMAGDGGEKEFVEC 237

Query: 197 RVVATFVCNDEEEKGYLEMREVSLFMEDMGMMRLNGEKSLRILEEAMVCGERKKANGGEE 376
            V+   VC  ++E G +E+RE+S+ MEDM    L G++SL +++EAM  GER+K   G E
Sbjct: 238 GVM---VCCGKKEGGEMEVREISMGMEDMEGRNLTGKESLVVIQEAMERGERRKGKCGTE 294

Query: 377 KKEMYVKYM 403
            K  Y +++
Sbjct: 295 GKGRYEEFV 303


>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
           gi|223536939|gb|EEF38577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  100 bits (249), Expect = 1e-19
 Identities = 58/130 (44%), Positives = 85/130 (65%), Gaps = 5/130 (3%)
 Frame = +2

Query: 23  ELEKKLTLSWIIIDPNAKRALNLSSLRPVSVRLCWDGSDIEVIYATIL-----RDSLSEF 187
           +LE+ +TLSWI+IDP  KRA+N+SS RPVSV+  W   +++  +ATI      + S +E+
Sbjct: 174 QLEEDVTLSWILIDPEQKRAVNISSKRPVSVQRHWLTGEVQAKFATIFAGDRGKGSETEY 233

Query: 188 VECRVVATFVCNDEEEKGYLEMREVSLFMEDMGMMRLNGEKSLRILEEAMVCGERKKANG 367
           VEC VV T  C   +E G + +R+VS+ MEDM    L GE SL IL+EA   GER++   
Sbjct: 234 VECEVVVT--CGG-KEGGEVRVRDVSMGMEDMEGKALTGEDSLVILKEATERGERRRGED 290

Query: 368 GEEKKEMYVK 397
           G+E+ + ++K
Sbjct: 291 GKERYKEFLK 300


>ref|XP_002523850.1| conserved hypothetical protein [Ricinus communis]
           gi|223536938|gb|EEF38576.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 3/130 (2%)
 Frame = +2

Query: 23  ELEKKLTLSWIIIDPNAKRALNLSSLRPVSVRLCWDGSDIEVIYATIL---RDSLSEFVE 193
           +LE+ +TLSWI+IDP  KRA+NLSS R VSV+  W   ++ V +ATIL   + S  E+VE
Sbjct: 175 QLEENVTLSWILIDPKQKRAMNLSSKRAVSVQRHWLTGEVLVKFATILAGIKGSEKEYVE 234

Query: 194 CRVVATFVCNDEEEKGYLEMREVSLFMEDMGMMRLNGEKSLRILEEAMVCGERKKANGGE 373
           C +V T    + EE   + +R+VS+ M+DM    L G+ SL IL  AM  GER+K   GE
Sbjct: 235 CEMVVTCGGKEGEE---VRVRDVSMRMDDMEGRSLTGKDSLVILNGAMERGERRK---GE 288

Query: 374 EKKEMYVKYM 403
           + KE Y  ++
Sbjct: 289 DGKERYKDFL 298


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