BLASTX nr result

ID: Bupleurum21_contig00037683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037683
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB78071.1| putative protein [Arabidopsis thaliana]                92   6e-17
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    88   6e-16
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    86   4e-15
dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    84   1e-14
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]    84   2e-14

>emb|CAB78071.1| putative protein [Arabidopsis thaliana]
          Length = 290

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/103 (38%), Positives = 65/103 (63%)
 Frame = +3

Query: 3   TQSVSEFFTNLKTIWDGLNDADPLPYCTCKKCECNLSQRVQQKQQEHRVLQFMMRLSESF 182
           +  VS ++T L T+W+   +   LP CTC +CECN S   ++ QQ  RV +F+M L+E++
Sbjct: 137 SMDVSTYYTELVTLWEEYKNYIELPLCTCGRCECNASALWEKMQQRSRVTKFLMGLNEAY 196

Query: 183 STVRGNILMMQPLPNLAQVYRIVAQEESHKEISQAANADSLAF 311
              + +ILM++P+P +  V+ +VAQ+E  K I   A  D++AF
Sbjct: 197 EATQRHILMLKPIPTIEDVFNMVAQDERQKSIKPVAKMDNVAF 239


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 37/87 (42%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +3

Query: 6   QSVSEFFTNLKTIWDGLNDADPLPYCTCKKCECNLSQRVQQKQQEHRVLQFMMRLSE-SF 182
           Q +  ++  LK++WD LN+ D +P CTC +C+C ++ ++++K++E RV QF+M L E  +
Sbjct: 94  QGIIVYYGKLKSLWDELNNYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGY 153

Query: 183 STVRGNILMMQPLPNLAQVYRIVAQEE 263
            TVR NIL ++PL NL +VY ++ Q+E
Sbjct: 154 GTVRSNILSIEPLSNLNRVYAMIVQQE 180


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/94 (42%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = +3

Query: 6   QSVSEFFTNLKTIWDGLNDADPLPYCTCKKCECNLSQRVQQKQQEHRVLQFMMRL-SESF 182
           Q +  ++  LK IWD LN+ D +P C C  C+CNL+  +++K++E RV QF+M L  E +
Sbjct: 106 QVIVTYYGKLKMIWDELNNYDKMPVCNCVGCKCNLTIVLEKKREEERVHQFLMGLDEEGY 165

Query: 183 STVRGNILMMQPLPNLAQVYRIVAQEESHKEISQ 284
            TV  NIL  +PLPNL +VY +V Q+E  + +++
Sbjct: 166 GTVSSNILSTEPLPNLNRVYAMVVQQERMRTMTR 199


>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   TQSVSEFFTNLKTIWDGLNDADPLPYCTCKKCECNLSQRVQQKQQEHRVLQFMMRLSESF 182
           T  V+ +F  LK IWD +   +    C+C+ C C       + Q++ +++QF+M L+E +
Sbjct: 158 TNDVAAYFNKLKRIWDQMKVLNTFMVCSCE-CNCEAKGHNAKMQEDQQLIQFLMGLNEVY 216

Query: 183 STVRGNILMMQPLPNLAQVYRIVAQEESHKEISQAAN--ADSLAF 311
           S +RGNILMM+PLP+ AQ Y I++ EE+ + I+   N   DS AF
Sbjct: 217 SGIRGNILMMKPLPSTAQAYSIISHEETQRGIAAGNNVSTDSAAF 261


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +3

Query: 6   QSVSEFFTNLKTIWDGLNDADPLPYCTCKKCECNLSQRVQQKQQEHRVLQFMMRLSES-F 182
           Q +  ++  LK++WD LN+ D +P CTC  C+CN++ ++++K++  RV QF++ L E+ +
Sbjct: 41  QGIVXYYGRLKSLWDELNNYDLIPVCTCTGCKCNITIQLEKKREXERVHQFLIGLDENGY 100

Query: 183 STVRGNILMMQPLPNLAQVYRIVAQEE 263
            TV  NIL  +PLPNL  VY ++ Q+E
Sbjct: 101 GTVXSNILSXEPLPNLNXVYAMIVQQE 127


Top