BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037643
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    66   3e-09
ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu...    63   3e-08
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    59   5e-07
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    57   2e-06

>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
 Frame = -2

Query: 352 QLQRRHVPVDNA--CPLCKVAEETVYHALVTCHFASQCWE-NVLPGGCRTNAENYTEWF- 185
           Q+  R + +DN   CPLC    E++YHAL+ C F  + W  +VL      N  +  +W  
Sbjct: 69  QMSHRCLRIDNQNLCPLCSNPGESIYHALIDCSFVKEVWVISVLVSRGNRNG-SICDWLQ 127

Query: 184 -----YSKDQMRVIVMMSWGIWKAINEVVWQQKSLQVNNVVGSTMQYLENWKNAQ 35
                + K     I  + W +W   NEVVW  K  Q   +V   + YL+ W  AQ
Sbjct: 128 EIFTKFDKSTWHCIAAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQ 182


>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
           gi|223527217|gb|EEF29381.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 197

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 7/109 (6%)
 Frame = -2

Query: 340 RHVPVDNACPLCKVAEETVYHALVTCHFASQCWE-NVLPGGCRTNAENYTEWF------Y 182
           + V V + CPLC    E++Y+AL+ C F  + W  +VL      N  +  +W       +
Sbjct: 7   KRVNVQDLCPLCSKPGESIYYALIDCSFVKEVWVISVLISRGNRNG-SICDWLQEMFTKF 65

Query: 181 SKDQMRVIVMMSWGIWKAINEVVWQQKSLQVNNVVGSTMQYLENWKNAQ 35
            K     I ++ W +W   NEVVW  K  Q   +V   + YL  W  AQ
Sbjct: 66  EKSTWGCIAVLVWNLWIHRNEVVWYSKRKQPTQIVDGAVTYLHKWLIAQ 114


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 11/123 (8%)
 Frame = -2

Query: 349 LQRRHVPVDNACPLCKVAEETVYHALVTCHFASQCWENV-----------LPGGCRTNAE 203
           L  R V  D++CP C    ET+ H LV C   +Q W+ V           L  G R+  E
Sbjct: 214 LVMRKVTEDSSCPCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLSQVSNLLEGARSVFE 273

Query: 202 NYTEWFYSKDQMRVIVMMSWGIWKAINEVVWQQKSLQVNNVVGSTMQYLENWKNAQTVTH 23
           ++ +   +       V++ W +W  +N+VVW  K L    V      +L  W  A+ +T 
Sbjct: 274 HFDDSIVAS-----FVVLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKARKLTD 328

Query: 22  IAQ 14
             Q
Sbjct: 329 YHQ 331


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 6/107 (5%)
 Frame = -2

Query: 340 RHVPVDNACPLCKVAEETVYHALVTCHFASQCWENVLPGGCRTNAENYTEWFYSKDQMRV 161
           RHV     CP+C+   ET  HALV C  A   W+       + N  ++ +W  +      
Sbjct: 541 RHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCD 600

Query: 160 IVMMS------WGIWKAINEVVWQQKSLQVNNVVGSTMQYLENWKNA 38
            V+ +      WG+W   N+VVW  +      VV      LE+W +A
Sbjct: 601 FVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESWFHA 647