BLASTX nr result

ID: Bupleurum21_contig00037636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037636
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                  80   1e-27
ref|XP_004154025.1| PREDICTED: uncharacterized protein LOC101211...    79   8e-26
ref|XP_004154269.1| PREDICTED: uncharacterized protein LOC101204...    76   2e-25
ref|XP_004153504.1| PREDICTED: uncharacterized protein LOC101213...    79   9e-24
ref|XP_004153378.1| PREDICTED: uncharacterized protein LOC101218...    78   9e-24

>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score = 79.7 bits (195), Expect(3) = 1e-27
 Identities = 33/54 (61%), Positives = 47/54 (87%)
 Frame = +1

Query: 103 ILEKVGKVVYQLTLPPSVSKVHNVFHISLLRIYISDPSHVFNYEPLELNQDLTY 264
           ILE++G V Y+L LPPS+S VH+VFH+S+LR Y+ DPSHV +YEPLE++++L+Y
Sbjct: 817 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSY 870



 Score = 50.8 bits (120), Expect(3) = 1e-27
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = +2

Query: 305 LRNKQIQLVKVLWKNFSTEESTWEREDERR 394
           LRNKQI LVKVLW+N   EE+TWERED+ R
Sbjct: 885 LRNKQIPLVKVLWRNHRVEEATWEREDDMR 914



 Score = 37.7 bits (86), Expect(3) = 1e-27
 Identities = 19/37 (51%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   NVEFLIGDKV*LKIAR---VMRFGKKGKLSFRFIRPY 104
           ++EF +GDKV LK+A    V+RF ++GKLS RF+ P+
Sbjct: 779 DLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPF 815


>ref|XP_004154025.1| PREDICTED: uncharacterized protein LOC101211634 [Cucumis sativus]
          Length = 207

 Score = 78.6 bits (192), Expect(3) = 8e-26
 Identities = 34/54 (62%), Positives = 46/54 (85%)
 Frame = +1

Query: 103 ILEKVGKVVYQLTLPPSVSKVHNVFHISLLRIYISDPSHVFNYEPLELNQDLTY 264
           ILE+VG V Y+L LPPS+S VHNVFH+S+LR Y++D SHV +YEPLE+++ L+Y
Sbjct: 101 ILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSY 154



 Score = 47.0 bits (110), Expect(3) = 8e-26
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +2

Query: 305 LRNKQIQLVKVLWKNFSTEESTWEREDERR 394
           LRN+ I LVKVLW+N   EE+TWERE+E R
Sbjct: 169 LRNRSIPLVKVLWRNHRIEEATWEREEEMR 198



 Score = 36.6 bits (83), Expect(3) = 8e-26
 Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   NVEFLIGDKV*LKIAR---VMRFGKKGKLSFRFIRPY 104
           +++F +GD + LK+A    VMRF KKGKLS RF+ P+
Sbjct: 63  DLKFDVGDMIFLKVAPMKGVMRFEKKGKLSPRFVGPF 99


>ref|XP_004154269.1| PREDICTED: uncharacterized protein LOC101204584 [Cucumis sativus]
          Length = 207

 Score = 76.3 bits (186), Expect(3) = 2e-25
 Identities = 33/54 (61%), Positives = 45/54 (83%)
 Frame = +1

Query: 103 ILEKVGKVVYQLTLPPSVSKVHNVFHISLLRIYISDPSHVFNYEPLELNQDLTY 264
           ILE+VG V Y+L LPPS+S VHNVFH+S+LR Y++D SHV +YEPL +++ L+Y
Sbjct: 101 ILERVGVVAYRLALPPSLSTVHNVFHVSMLRKYVADTSHVVDYEPLAIDEHLSY 154



 Score = 47.0 bits (110), Expect(3) = 2e-25
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +2

Query: 305 LRNKQIQLVKVLWKNFSTEESTWEREDERR 394
           LRN+ I LVKVLW+N   EE+TWERE+E R
Sbjct: 169 LRNRSIPLVKVLWRNHRIEEATWEREEEMR 198



 Score = 37.7 bits (86), Expect(3) = 2e-25
 Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 3/37 (8%)
 Frame = +3

Query: 3   NVEFLIGDKV*LKIAR---VMRFGKKGKLSFRFIRPY 104
           +++F +G+KV LK+A    VMRF KKGKLS RF+ P+
Sbjct: 63  DLKFDVGEKVFLKVAPMKGVMRFEKKGKLSPRFVGPF 99


>ref|XP_004153504.1| PREDICTED: uncharacterized protein LOC101213634 [Cucumis sativus]
          Length = 237

 Score = 78.6 bits (192), Expect(3) = 9e-24
 Identities = 34/54 (62%), Positives = 46/54 (85%)
 Frame = +1

Query: 103 ILEKVGKVVYQLTLPPSVSKVHNVFHISLLRIYISDPSHVFNYEPLELNQDLTY 264
           ILE+VG V Y+L LPPS+S VHNVFH+S+LR Y++D SHV +YEPLE+++ L+Y
Sbjct: 131 ILERVGVVAYRLALPPSLSAVHNVFHVSMLRKYVADTSHVVDYEPLEIDEHLSY 184



 Score = 47.0 bits (110), Expect(3) = 9e-24
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = +2

Query: 305 LRNKQIQLVKVLWKNFSTEESTWEREDERR 394
           LRN+ I LVKVLW+N   EE+TWERE+E R
Sbjct: 199 LRNRSIPLVKVLWRNHRIEEATWEREEEMR 228



 Score = 29.6 bits (65), Expect(3) = 9e-24
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = +3

Query: 51  VMRFGKKGKLSFRFIRPY 104
           VMRF KKGKLS RF+ P+
Sbjct: 112 VMRFEKKGKLSPRFVGPF 129


>ref|XP_004153378.1| PREDICTED: uncharacterized protein LOC101218423 [Cucumis sativus]
          Length = 207

 Score = 77.8 bits (190), Expect(3) = 9e-24
 Identities = 30/57 (52%), Positives = 47/57 (82%)
 Frame = +1

Query: 103 ILEKVGKVVYQLTLPPSVSKVHNVFHISLLRIYISDPSHVFNYEPLELNQDLTYDAK 273
           ILE++G V Y L LPP +S VH+VFH+S+LR Y++DPSH+ +Y+PL++N +L+Y+ +
Sbjct: 101 ILERIGPVAYHLALPPQLSAVHDVFHVSMLRKYVADPSHIVDYKPLQINDNLSYEER 157



 Score = 43.5 bits (101), Expect(3) = 9e-24
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +2

Query: 305 LRNKQIQLVKVLWKNFSTEESTWEREDERR 394
           L N+ I LVKVLW+N   EE+TWERED  R
Sbjct: 169 LCNRGITLVKVLWRNHEVEEATWEREDNMR 198



 Score = 33.9 bits (76), Expect(3) = 9e-24
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 3/34 (8%)
 Frame = +3

Query: 3   NVEFLIGDKV*LKIAR---VMRFGKKGKLSFRFI 95
           ++EF +GD + LK+A    V+RF KKGKLS RF+
Sbjct: 63  DLEFDVGDMIFLKVAPITGVLRFEKKGKLSPRFV 96


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