BLASTX nr result

ID: Bupleurum21_contig00037617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037617
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36701.1| GRF domain class transcription factor [Malus x do...    55   5e-06

>gb|ADL36701.1| GRF domain class transcription factor [Malus x domestica]
          Length = 600

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
 Frame = +1

Query: 1   PLGEALHNTSTSVE-ASRSSLMLNLANREFWDSHSKLESSPTGVLQKTTL-XXXXXXXXX 174
           PLGE + NT++S +  + S+  LNL N E WD +S+L SSPTGVLQK+T           
Sbjct: 508 PLGEVITNTTSSGKICNNSTSPLNLLN-EGWDGNSQLGSSPTGVLQKSTFCSLSNSSSGS 566

Query: 175 XPRGG----NHVGGSSVPDDVPCSALVSIP 252
            PRGG    + + G+S+ DDV  S   S P
Sbjct: 567 SPRGGEIKKSSLDGASIYDDVLGSTFASSP 596


Top