BLASTX nr result

ID: Bupleurum21_contig00037604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037604
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   109   3e-22
gb|ABB47537.2| retrotransposon protein, putative, unclassified [...   108   6e-22
emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group]        106   2e-21
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   105   5e-21
gb|ABF94034.1| retrotransposon protein, putative, unclassified [...   104   6e-21

>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  109 bits (272), Expect = 3e-22
 Identities = 52/102 (50%), Positives = 68/102 (66%)
 Frame = +2

Query: 2    KQRNVALXXXXXXXXXXXXXXXQGIWLRSLMRELTGQCVGPVTIFVDNKSSIDLAKNPIF 181
            KQ+ VAL                 +WLR+L+ E+ G    PV +FVDNKS+I L KNP+F
Sbjct: 1304 KQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKPVKLFVDNKSAIALMKNPVF 1363

Query: 182  HGRSKHIDIRFHFIRECVERGEVILKHVCTEEQRADHLTPDL 307
            HGRSKHID R+HFIRECVE G+++++ V +EEQRAD +T  L
Sbjct: 1364 HGRSKHIDTRYHFIRECVESGQILIEFVSSEEQRADAMTKGL 1405


>gb|ABB47537.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1172

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/102 (52%), Positives = 67/102 (65%)
 Frame = +2

Query: 2    KQRNVALXXXXXXXXXXXXXXXQGIWLRSLMRELTGQCVGPVTIFVDNKSSIDLAKNPIF 181
            KQ+ VAL               Q +WLR L+ E+ G    PV ++VDNKS+I L KNP+F
Sbjct: 1067 KQKTVALSSCEAEFMAATAAACQALWLRGLLIEMIGAEARPVKLYVDNKSAIALMKNPVF 1126

Query: 182  HGRSKHIDIRFHFIRECVERGEVILKHVCTEEQRADHLTPDL 307
            HGRSKHID R+HFIRECVE G++ ++ V TEEQRAD LT  L
Sbjct: 1127 HGRSKHIDTRYHFIRECVESGKIQIEFVRTEEQRADALTKGL 1168


>emb|CAE04421.2| OSJNBb0040D15.11 [Oryza sativa Japonica Group]
          Length = 346

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/102 (51%), Positives = 66/102 (64%)
 Frame = +2

Query: 2   KQRNVALXXXXXXXXXXXXXXXQGIWLRSLMRELTGQCVGPVTIFVDNKSSIDLAKNPIF 181
           KQ+ VAL                 +WLR L+ E+ G    PV ++VDNKS+I L KNP+F
Sbjct: 226 KQKTVALSSCEAEFMAATAAACHALWLRGLLIEMIGAEARPVKLYVDNKSAIALMKNPVF 285

Query: 182 HGRSKHIDIRFHFIRECVERGEVILKHVCTEEQRADHLTPDL 307
           HGRSKHID R+HFIRECVE G++ ++ V TEEQRAD LT  L
Sbjct: 286 HGRSKHIDTRYHFIRECVESGKIQIEFVRTEEQRADALTKGL 327


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/102 (50%), Positives = 67/102 (65%)
 Frame = +2

Query: 2    KQRNVALXXXXXXXXXXXXXXXQGIWLRSLMRELTGQCVGPVTIFVDNKSSIDLAKNPIF 181
            KQ+ VAL                 +WLR+L+ E+ G     V +FVDNKS+I L KNP+F
Sbjct: 1304 KQKTVALSSCEAEFMAATAAACHALWLRALLSEMMGTEAKRVKLFVDNKSAIALMKNPVF 1363

Query: 182  HGRSKHIDIRFHFIRECVERGEVILKHVCTEEQRADHLTPDL 307
            HGRSKHID R+HFIRECVE G+++++ V +EEQRAD +T  L
Sbjct: 1364 HGRSKHIDTRYHFIRECVESGQILIEFVRSEEQRADAMTKGL 1405


>gb|ABF94034.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1409

 Score =  104 bits (260), Expect = 6e-21
 Identities = 52/102 (50%), Positives = 67/102 (65%)
 Frame = +2

Query: 2    KQRNVALXXXXXXXXXXXXXXXQGIWLRSLMRELTGQCVGPVTIFVDNKSSIDLAKNPIF 181
            KQ+ VAL               Q +WLR L+ E+ G     V +FVDN+S+I L KNP+F
Sbjct: 1286 KQKTVALSSCEAEFMAATTAACQALWLRLLLAEVAGVEEKAVKLFVDNRSAIALMKNPVF 1345

Query: 182  HGRSKHIDIRFHFIRECVERGEVILKHVCTEEQRADHLTPDL 307
            HGRSKHID R+HFIRECV+ G+++++ V TEEQRAD LT  L
Sbjct: 1346 HGRSKHIDTRYHFIRECVDGGQIVVEFVRTEEQRADALTKGL 1387


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