BLASTX nr result
ID: Bupleurum21_contig00037573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00037573
(576 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL78658.1|AF405555_1 Hopscotch polyprotein [Fagus sylvatica] 135 4e-37
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 130 2e-33
emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera] 126 2e-33
emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera] 128 5e-33
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 124 5e-33
>gb|AAL78658.1|AF405555_1 Hopscotch polyprotein [Fagus sylvatica]
Length = 226
Score = 135 bits (339), Expect(3) = 4e-37
Identities = 62/104 (59%), Positives = 77/104 (74%)
Frame = -3
Query: 565 SCPHTPQQNGRAERKHRHITKTGLTILYHSKAPMFLWVEAFHTAVYLINRLPSKVLGYLF 386
SCP TP+QNG AERKHRHI +TGLT+L+H++ P LW+EAF TAVYLINRLPS L +
Sbjct: 83 SCPGTPEQNGVAERKHRHIVETGLTMLFHARLPKNLWIEAFMTAVYLINRLPSSKLAHDT 142
Query: 385 PYEKLYGTTPSYSSLRTFGSRCYPNLVDYRKTKFDPKVCTMCFL 254
P+ KL+G P Y+SL+ FG RC+P L DY K KF+PK F+
Sbjct: 143 PFFKLHGVHPDYNSLKVFGCRCFPYLRDYAKNKFEPKSYPCIFI 186
Score = 40.4 bits (93), Expect(3) = 4e-37
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = -2
Query: 257 FVGYSQYHKGFRCYHPPTRVMY 192
F+GYS HKG+RC HPPT+ +Y
Sbjct: 185 FIGYSPLHKGYRCLHPPTKRVY 206
Score = 25.4 bits (54), Expect(3) = 4e-37
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 204 TRHVLFDESILPF 166
+RHV+FDE ILP+
Sbjct: 208 SRHVVFDEGILPY 220
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 130 bits (326), Expect(3) = 2e-33
Identities = 60/106 (56%), Positives = 73/106 (68%)
Frame = -3
Query: 571 QYSCPHTPQQNGRAERKHRHITKTGLTILYHSKAPMFLWVEAFHTAVYLINRLPSKVLGY 392
Q SCP+TP QNGRAERKHRH+T+TGL +L+HS P WV+AF TA Y+INRLP VLG
Sbjct: 560 QMSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWVDAFSTATYIINRLPLPVLGG 619
Query: 391 LFPYEKLYGTTPSYSSLRTFGSRCYPNLVDYRKTKFDPKVCTMCFL 254
L P+E L+G +P+Y + FG R YP L DY KF P+ FL
Sbjct: 620 LSPFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFL 665
Score = 30.8 bits (68), Expect(3) = 2e-33
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 257 FVGYSQYHKGFRCYHPPTRVMY 192
F+GYS HKGFRC+ T Y
Sbjct: 664 FLGYSSSHKGFRCFDTTTSRTY 685
Score = 27.7 bits (60), Expect(3) = 2e-33
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 204 TRHVLFDESILPFISSNHDSSEPTLNSEWLEFDDPC-LVPTATVELPIYNQV 52
TRH FDE PF SN S+ + F +PC L P+ + P +V
Sbjct: 687 TRHARFDEHFFPF--SNTSSATSIADIGLSNFFEPCALEPSPSTSSPTTTRV 736
>emb|CAN74381.1| hypothetical protein VITISV_007944 [Vitis vinifera]
Length = 1884
Score = 126 bits (317), Expect(2) = 2e-33
Identities = 61/107 (57%), Positives = 75/107 (70%)
Frame = -3
Query: 574 RQYSCPHTPQQNGRAERKHRHITKTGLTILYHSKAPMFLWVEAFHTAVYLINRLPSKVLG 395
+Q SCP TP+QNG AERKHRHI + GLT+L+++K P+ LWV+AF TAVYLINRLPS VL
Sbjct: 552 QQVSCPGTPEQNGVAERKHRHIVEMGLTMLFNAKLPLSLWVDAFLTAVYLINRLPSTVLK 611
Query: 394 YLFPYEKLYGTTPSYSSLRTFGSRCYPNLVDYRKTKFDPKVCTMCFL 254
P+ L+ P Y SLR FG +C+P L DY K KF PK F+
Sbjct: 612 MESPFFMLFKQYPEYRSLRIFGCQCFPYLRDYGKNKFSPKTYPCVFI 658
Score = 41.6 bits (96), Expect(2) = 2e-33
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -2
Query: 257 FVGYSQYHKGFRCYHPPTRVMY----YLMNRFCHLYQVTMIPLNRL 132
F+GYS HKG+RC HP T+ +Y + N C Y +++ N L
Sbjct: 657 FIGYSSLHKGYRCLHPSTKRVYISRHVIFNENCFPYDNSLVKENHL 702
>emb|CAN67588.1| hypothetical protein VITISV_036280 [Vitis vinifera]
Length = 1379
Score = 128 bits (322), Expect(3) = 5e-33
Identities = 59/104 (56%), Positives = 72/104 (69%)
Frame = -3
Query: 565 SCPHTPQQNGRAERKHRHITKTGLTILYHSKAPMFLWVEAFHTAVYLINRLPSKVLGYLF 386
SCP+TP QNGRAERKHRH+T+TGL +L+HS P WV+AF TA Y+INRLP VLG L
Sbjct: 2 SCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPQYWVDAFSTATYIINRLPLPVLGGLS 61
Query: 385 PYEKLYGTTPSYSSLRTFGSRCYPNLVDYRKTKFDPKVCTMCFL 254
P+E L+G +P+Y + FG R YP L DY KF P+ FL
Sbjct: 62 PFEVLFGKSPNYENFHPFGCRVYPCLRDYAPHKFSPRSLPCIFL 105
Score = 30.8 bits (68), Expect(3) = 5e-33
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 257 FVGYSQYHKGFRCYHPPTRVMY 192
F+GYS HKGFRC+ T Y
Sbjct: 104 FLGYSSSHKGFRCFDTTTSRTY 125
Score = 27.7 bits (60), Expect(3) = 5e-33
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 204 TRHVLFDESILPFISSNHDSSEPTLNSEWLEFDDPC-LVPTATVELPIYNQV 52
TRH FDE PF SN S+ + F +PC L P+ + P +V
Sbjct: 127 TRHARFDEHFFPF--SNTSSATSIADIGLSNFFEPCALEPSPSTSSPTTTRV 176
>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
putative protein [Arabidopsis thaliana]
Length = 1318
Score = 124 bits (310), Expect(3) = 5e-33
Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 1/108 (0%)
Frame = -3
Query: 574 RQYSCPHTPQQNGRAERKHRHITKTGLTILYHSKAPMFLWVEAFHTAVYLINRLPSKVL- 398
+Q SCPHTPQQNG AERKHRH+ + GL++L+ S P WVEAF TA +LIN LP+ L
Sbjct: 417 QQLSCPHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTSALK 476
Query: 397 GYLFPYEKLYGTTPSYSSLRTFGSRCYPNLVDYRKTKFDPKVCTMCFL 254
+ PYEKLY P Y+SLR+FGS C+P L DY + KF+P FL
Sbjct: 477 ESISPYEKLYDKKPDYTSLRSFGSACFPTLRDYAENKFNPCSLKCVFL 524
Score = 33.5 bits (75), Expect(3) = 5e-33
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 257 FVGYSQYHKGFRCYHPPTRVMY 192
F+GY++ +KG+RC +PPT +Y
Sbjct: 523 FLGYNEKYKGYRCLYPPTGRLY 544
Score = 29.6 bits (65), Expect(3) = 5e-33
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -1
Query: 204 TRHVLFDESILPFISSN---HDSSEPTLNSEWLEFDDPCLVPTAT 79
+RHV+FDES+ PF + H L + WL D T+T
Sbjct: 546 SRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPSTST 590