BLASTX nr result

ID: Bupleurum21_contig00037566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037566
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putativ...    78   7e-13
ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   1e-12
ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   1e-12
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   1e-12
ref|XP_002991105.1| hypothetical protein SELMODRAFT_132834 [Sela...    77   2e-12

>ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531759|gb|EEF33579.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 500

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -1

Query: 150 ETIRKKYRIYIEGENTPPPISNFKDMRFPEPFLKKLAEKGIVKPTPIQVQ 1
           + IRK++ I ++GE+ PPPI NFK MRFPEP LKKL +KGIV+PTPIQVQ
Sbjct: 35  DAIRKQWHIIVDGEDIPPPIKNFKSMRFPEPILKKLKDKGIVQPTPIQVQ 84


>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
           vinifera] gi|147861063|emb|CAN78736.1| hypothetical
           protein VITISV_003102 [Vitis vinifera]
           gi|297743544|emb|CBI36411.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -1

Query: 150 ETIRKKYRIYIEGENTPPPISNFKDMRFPEPFLKKLAEKGIVKPTPIQVQ 1
           E+IRK++ I ++G+  PPPI NFKDMRFPEP LK L  KGIV+PTPIQVQ
Sbjct: 122 ESIRKQWHIIVDGDEIPPPIKNFKDMRFPEPILKNLKAKGIVQPTPIQVQ 171


>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -1

Query: 150 ETIRKKYRIYIEGENTPPPISNFKDMRFPEPFLKKLAEKGIVKPTPIQVQ 1
           + IRK++ I ++G+  PPPI NFKDMR PEP LKKL EKGIV+PTPIQVQ
Sbjct: 132 DLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQ 181


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
           sativus]
          Length = 597

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/50 (68%), Positives = 41/50 (82%)
 Frame = -1

Query: 150 ETIRKKYRIYIEGENTPPPISNFKDMRFPEPFLKKLAEKGIVKPTPIQVQ 1
           + IRK++ I ++G+  PPPI NFKDMR PEP LKKL EKGIV+PTPIQVQ
Sbjct: 132 DLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQ 181


>ref|XP_002991105.1| hypothetical protein SELMODRAFT_132834 [Selaginella moellendorffii]
           gi|300141199|gb|EFJ07913.1| hypothetical protein
           SELMODRAFT_132834 [Selaginella moellendorffii]
          Length = 601

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/61 (57%), Positives = 44/61 (72%)
 Frame = -1

Query: 183 SNTVKLMEDLIETIRKKYRIYIEGENTPPPISNFKDMRFPEPFLKKLAEKGIVKPTPIQV 4
           S+   + E   + IRK++ I +EGE  PPPI NFKDMRFP+P L+KL EK I +PTPIQV
Sbjct: 125 SHVRHMSEAECDEIRKQWHILVEGEEIPPPIKNFKDMRFPDPILRKLKEKSITRPTPIQV 184

Query: 3   Q 1
           Q
Sbjct: 185 Q 185


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