BLASTX nr result

ID: Bupleurum21_contig00037555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037555
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembran...   179   2e-43
ref|XP_003517074.1| PREDICTED: transmembrane protein 45B-like [G...   179   2e-43
emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]   179   2e-43
ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus...   177   8e-43
ref|XP_003534309.1| PREDICTED: transmembrane protein 45B-like [G...   176   1e-42

>ref|XP_002263042.2| PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 45B-like
           [Vitis vinifera]
          Length = 278

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/122 (68%), Positives = 96/122 (78%)
 Frame = +2

Query: 2   AFCAEYLLFYFHSTSHKGLEGHYHXXXXXXXXXCILSSIAGALMPTSFAADLCNGIAFTL 181
           AF AEY LFYFHST+HKGLEG+YH         CILS+I GALMPTSF  DLC GIA  L
Sbjct: 132 AFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFPVDLCCGIAIAL 191

Query: 182 QGLWFYQSAFTLYGPSMPDGCRLNENEISCDSVQHEIRGQLLANFQLFSIVLGLMVGVVG 361
           QGLWFYQ+AFTLYGP MP+GCRL EN ISC S ++++RG+LLANFQLF I  G++V VVG
Sbjct: 192 QGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFIIAFGVLVAVVG 251

Query: 362 SY 367
           SY
Sbjct: 252 SY 253


>ref|XP_003517074.1| PREDICTED: transmembrane protein 45B-like [Glycine max]
          Length = 278

 Score =  179 bits (455), Expect = 2e-43
 Identities = 83/122 (68%), Positives = 95/122 (77%)
 Frame = +2

Query: 2   AFCAEYLLFYFHSTSHKGLEGHYHXXXXXXXXXCILSSIAGALMPTSFAADLCNGIAFTL 181
           AF AEYLLFYFHST+HKGLEG+YH         CILSSIAGAL+PTSF  DLCNGIA  L
Sbjct: 132 AFTAEYLLFYFHSTTHKGLEGYYHTLLVFLVGLCILSSIAGALLPTSFPVDLCNGIAIAL 191

Query: 182 QGLWFYQSAFTLYGPSMPDGCRLNENEISCDSVQHEIRGQLLANFQLFSIVLGLMVGVVG 361
           QGLWFYQ+AF LYGP MP GC+L EN ++C S+  E+RG+LLANFQLF  VL ++VG V 
Sbjct: 192 QGLWFYQTAFVLYGPMMPSGCKLRENSVTCHSIDSEVRGELLANFQLFVAVLVVLVGTVA 251

Query: 362 SY 367
           SY
Sbjct: 252 SY 253


>emb|CAN68559.1| hypothetical protein VITISV_028486 [Vitis vinifera]
          Length = 301

 Score =  179 bits (455), Expect = 2e-43
 Identities = 84/122 (68%), Positives = 96/122 (78%)
 Frame = +2

Query: 2   AFCAEYLLFYFHSTSHKGLEGHYHXXXXXXXXXCILSSIAGALMPTSFAADLCNGIAFTL 181
           AF AEY LFYFHST+HKGLEG+YH         CILS+I GALMPTSF  DLC GIA  L
Sbjct: 132 AFSAEYFLFYFHSTTHKGLEGYYHLLLVILIGLCILSTIFGALMPTSFPVDLCCGIAIAL 191

Query: 182 QGLWFYQSAFTLYGPSMPDGCRLNENEISCDSVQHEIRGQLLANFQLFSIVLGLMVGVVG 361
           QGLWFYQ+AFTLYGP MP+GCRL EN ISC S ++++RG+LLANFQLF I  G++V VVG
Sbjct: 192 QGLWFYQTAFTLYGPMMPEGCRLKENMISCHSPEYQVRGELLANFQLFIIAFGVLVAVVG 251

Query: 362 SY 367
           SY
Sbjct: 252 SY 253


>ref|XP_002519856.1| Transmembrane protein 45a, putative [Ricinus communis]
           gi|223540902|gb|EEF42460.1| Transmembrane protein 45a,
           putative [Ricinus communis]
          Length = 278

 Score =  177 bits (449), Expect = 8e-43
 Identities = 79/122 (64%), Positives = 101/122 (82%)
 Frame = +2

Query: 2   AFCAEYLLFYFHSTSHKGLEGHYHXXXXXXXXXCILSSIAGALMPTSFAADLCNGIAFTL 181
           AFCAEYLLFYFHST+HKGLEG+YH         CILS++AG L+PTSF  DL +GIA TL
Sbjct: 132 AFCAEYLLFYFHSTTHKGLEGYYHLLLVLLIALCILSTVAGTLLPTSFPIDLSSGIAITL 191

Query: 182 QGLWFYQSAFTLYGPSMPDGCRLNENEISCDSVQHEIRGQLLANFQLFSIVLGLMVGVVG 361
           QGLWFYQ+AF+LYGP +PDGC+L  ++++C S+  ++RG+LLANFQLF++VLG++VGVV 
Sbjct: 192 QGLWFYQTAFSLYGPMVPDGCQLKNDQVTCRSMASQVRGELLANFQLFALVLGVLVGVVV 251

Query: 362 SY 367
           SY
Sbjct: 252 SY 253


>ref|XP_003534309.1| PREDICTED: transmembrane protein 45B-like [Glycine max]
          Length = 278

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/122 (67%), Positives = 93/122 (76%)
 Frame = +2

Query: 2   AFCAEYLLFYFHSTSHKGLEGHYHXXXXXXXXXCILSSIAGALMPTSFAADLCNGIAFTL 181
           AF AEYLLFYFHST+HKGLEG+YH         CILSSIAGAL+PTSF  DLCNGIA  L
Sbjct: 132 AFTAEYLLFYFHSTTHKGLEGYYHTLLVFVVGLCILSSIAGALLPTSFPVDLCNGIAIAL 191

Query: 182 QGLWFYQSAFTLYGPSMPDGCRLNENEISCDSVQHEIRGQLLANFQLFSIVLGLMVGVVG 361
           QGLWFYQ+AF LYGP MP GC+L EN + C S+  E+RG+LLAN QLF  VL ++VG V 
Sbjct: 192 QGLWFYQTAFVLYGPMMPSGCKLRENSVMCHSIDSEVRGELLANIQLFVAVLVVLVGTVA 251

Query: 362 SY 367
           SY
Sbjct: 252 SY 253


Top