BLASTX nr result

ID: Bupleurum21_contig00037544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037544
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516315.1| copine, putative [Ricinus communis] gi|22354...   163   1e-38
ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|XP_003523218.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   157   1e-36
ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago t...   154   5e-36
ref|XP_004166406.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   153   1e-35

>ref|XP_002516315.1| copine, putative [Ricinus communis] gi|223544545|gb|EEF46062.1|
           copine, putative [Ricinus communis]
          Length = 378

 Score =  163 bits (413), Expect = 1e-38
 Identities = 80/103 (77%), Positives = 86/103 (83%)
 Frame = -1

Query: 311 NLIPCFGFGDDA*VSFDILASTHDRHVFSFYPNNRPCRGFEEALARYREILPYINLSGPT 132
           NLIPCFGFGD         ASTHDR+VFSFYP+ RPC GFEEAL RYREI+PY+ LSGPT
Sbjct: 115 NLIPCFGFGD---------ASTHDRYVFSFYPDQRPCNGFEEALTRYREIVPYLKLSGPT 165

Query: 131 SFAPIIDAAIDIVEGSNGQYHVLVIIADGQVTRSPDLPLGRLS 3
           SFAPIIDAAI+IVE SNGQYHVLVIIADGQVTRSPD+P G  S
Sbjct: 166 SFAPIIDAAIEIVENSNGQYHVLVIIADGQVTRSPDIPPGSYS 208


>ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|222855711|gb|EEE93258.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/103 (75%), Positives = 84/103 (81%)
 Frame = -1

Query: 311 NLIPCFGFGDDA*VSFDILASTHDRHVFSFYPNNRPCRGFEEALARYREILPYINLSGPT 132
           NLIPCFGFGD         ASTHD+HVFSFYP+NRPC G EEAL RYREI+P++ LSGPT
Sbjct: 78  NLIPCFGFGD---------ASTHDKHVFSFYPDNRPCNGLEEALTRYREIVPHLKLSGPT 128

Query: 131 SFAPIIDAAIDIVEGSNGQYHVLVIIADGQVTRSPDLPLGRLS 3
           SFAPIIDAAIDIVE S GQYHVLV+IADGQVTR PD P GR S
Sbjct: 129 SFAPIIDAAIDIVEKSGGQYHVLVVIADGQVTRGPDTPPGRFS 171


>ref|XP_003523218.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 432

 Score =  157 bits (396), Expect = 1e-36
 Identities = 77/103 (74%), Positives = 86/103 (83%)
 Frame = -1

Query: 311 NLIPCFGFGDDA*VSFDILASTHDRHVFSFYPNNRPCRGFEEALARYREILPYINLSGPT 132
           NLIPCFGFGD         ASTHD++VF FY +NR C GFEE LARYREI+PYI LSGPT
Sbjct: 154 NLIPCFGFGD---------ASTHDQNVFCFYQDNRFCHGFEEVLARYREIVPYIKLSGPT 204

Query: 131 SFAPIIDAAIDIVEGSNGQYHVLVIIADGQVTRSPDLPLGRLS 3
           SFAP+IDAAIDIVE +NGQYHVLVIIADGQVTR+PD+P G+LS
Sbjct: 205 SFAPVIDAAIDIVERNNGQYHVLVIIADGQVTRNPDVPYGKLS 247


>ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago truncatula]
           gi|355491691|gb|AES72894.1| E3 ubiquitin-protein ligase
           mib1 [Medicago truncatula]
          Length = 432

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = -1

Query: 311 NLIPCFGFGDDA*VSFDILASTHDRHVFSFYPNNRPCRGFEEALARYREILPYINLSGPT 132
           NLIPCFGFGD         ASTHD++VFSFYP+NR C GFEE LARYR+I+P++ LSGPT
Sbjct: 154 NLIPCFGFGD---------ASTHDQNVFSFYPDNRVCHGFEEVLARYRQIVPHLKLSGPT 204

Query: 131 SFAPIIDAAIDIVEGSNGQYHVLVIIADGQVTRSPDLPLGRLS 3
           SFAP+IDAAIDIVE +NGQYHVLVIIADGQVTR+P  P G+LS
Sbjct: 205 SFAPVIDAAIDIVERNNGQYHVLVIIADGQVTRNPGTPHGKLS 247


>ref|XP_004166406.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Cucumis sativus]
          Length = 364

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/102 (74%), Positives = 86/102 (84%)
 Frame = -1

Query: 308 LIPCFGFGDDA*VSFDILASTHDRHVFSFYPNNRPCRGFEEALARYREILPYINLSGPTS 129
           LIPCFGFGD         AST D+HVFSFYP++RPC+GF+EAL RYREILPY+NLSGPTS
Sbjct: 90  LIPCFGFGD---------ASTCDQHVFSFYPDHRPCKGFKEALFRYREILPYLNLSGPTS 140

Query: 128 FAPIIDAAIDIVEGSNGQYHVLVIIADGQVTRSPDLPLGRLS 3
           FAP+IDAAI IVE SN QYHVLVIIADGQVTR+P+ P G+LS
Sbjct: 141 FAPVIDAAIGIVEKSNWQYHVLVIIADGQVTRNPNTPPGKLS 182


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