BLASTX nr result

ID: Bupleurum21_contig00037532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037532
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   223   2e-56
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]   207   1e-51
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   201   4e-50
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   200   1e-49
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   200   1e-49

>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  223 bits (567), Expect = 2e-56
 Identities = 103/174 (59%), Positives = 134/174 (77%)
 Frame = -2

Query: 528  KYVHDMLVEAGLEHCKPLSLPVDTTVKLSLNDGFPIDDASLYRKLIGKLLYLTATRPDIA 349
            KYV D+L + G   CK  S P++  VKLS+++G  + D SLYR+L+GKLLYLT TRPDI+
Sbjct: 1000 KYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPDVSLYRRLLGKLLYLTLTRPDIS 1059

Query: 348  YIVHHLSQFVQSPKAPHLLAVQRVLRYLKGTPYQGVFFSASSNLQLFAYSDSDWGACSDT 169
            Y+V  LSQF+  PK PHL A QR+LRYLKG P  G+FF ++S L L AY+DSDW  C D+
Sbjct: 1060 YVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMAYTDSDWARCPDS 1119

Query: 168  SRSVTGYCVFLGNSLVNWKSKKQSVVSRSTAESELRALAETACDLAWMVLLLSE 7
             RSVTG+CVFLGNSLV+WKSKKQ +VSRS+AE+E RA+A T+C++ W++ LL +
Sbjct: 1120 RRSVTGFCVFLGNSLVSWKSKKQHIVSRSSAEAEYRAMANTSCEITWLLALLKD 1173


>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
          Length = 1031

 Score =  207 bits (526), Expect = 1e-51
 Identities = 94/175 (53%), Positives = 132/175 (75%)
 Frame = -2

Query: 528  KYVHDMLVEAGLEHCKPLSLPVDTTVKLSLNDGFPIDDASLYRKLIGKLLYLTATRPDIA 349
            KY  ++L E G   CKP   P+   ++LS +DG  + D ++YR+LIGKL+YLT TRP++ 
Sbjct: 749  KYALELLSETGYLGCKPAKTPMQLNMQLSQDDGELLTDPNMYRRLIGKLIYLTITRPNLT 808

Query: 348  YIVHHLSQFVQSPKAPHLLAVQRVLRYLKGTPYQGVFFSASSNLQLFAYSDSDWGACSDT 169
            Y ++ L QF+  P+ PHL AV R+L+Y+KG+P +G+FFSASS+LQL A+SDSDW AC D+
Sbjct: 809  YSMNKLIQFLSQPRRPHLQAVYRILQYIKGSPGKGIFFSASSSLQLKAFSDSDWAACPDS 868

Query: 168  SRSVTGYCVFLGNSLVNWKSKKQSVVSRSTAESELRALAETACDLAWMVLLLSEL 4
             +SVTG+C+FLG+SL++WKSKKQ  VSRS+AE+E RA+A   C+L W + LL +L
Sbjct: 869  RKSVTGFCIFLGDSLISWKSKKQRTVSRSSAEAEYRAMAHVTCELTWFISLLKDL 923


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  201 bits (512), Expect = 4e-50
 Identities = 94/176 (53%), Positives = 130/176 (73%)
 Frame = -2

Query: 528 KYVHDMLVEAGLEHCKPLSLPVDTTVKLSLNDGFPIDDASLYRKLIGKLLYLTATRPDIA 349
           KY  D++ EAGL  CKP  +P+DT  KLSL+    ++D + YR+L+G+L+YLT TRPD+A
Sbjct: 134 KYALDLISEAGLLGCKPSKIPMDTKHKLSLSTSPLLEDPAPYRRLVGQLIYLTNTRPDLA 193

Query: 348 YIVHHLSQFVQSPKAPHLLAVQRVLRYLKGTPYQGVFFSASSNLQLFAYSDSDWGACSDT 169
           Y VH LSQF+  P   HL A  RVLRYLKG P QGVF+ ++  LQL  + D+DWG+C  T
Sbjct: 194 YSVHILSQFMNKPTEDHLAAAHRVLRYLKGCPAQGVFYPSNQTLQLSVFCDADWGSCPLT 253

Query: 168 SRSVTGYCVFLGNSLVNWKSKKQSVVSRSTAESELRALAETACDLAWMVLLLSELQ 1
            RSV+G CV LG S+++WK+KKQ++VSRS+AE+E RA+A   C+++W+  LL++LQ
Sbjct: 254 RRSVSGCCVLLGQSVISWKTKKQAIVSRSSAEAEYRAMAHACCEVSWLTRLLADLQ 309


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  200 bits (509), Expect = 1e-49
 Identities = 92/176 (52%), Positives = 127/176 (72%)
 Frame = -2

Query: 528  KYVHDMLVEAGLEHCKPLSLPVDTTVKLSLNDGFPIDDASLYRKLIGKLLYLTATRPDIA 349
            KY  D+L ++GL  CKP S P+DT++KL    G P  D S YR+++GKLLYL  TRPDIA
Sbjct: 1150 KYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIA 1209

Query: 348  YIVHHLSQFVQSPKAPHLLAVQRVLRYLKGTPYQGVFFSASSNLQLFAYSDSDWGACSDT 169
            +    LSQF+Q+P   H  A  RVLRYLK  P QG+FFS +S +QL  YSD+DW  C D+
Sbjct: 1210 FATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDS 1269

Query: 168  SRSVTGYCVFLGNSLVNWKSKKQSVVSRSTAESELRALAETACDLAWMVLLLSELQ 1
             +S++GYC F+G SLV+W++KKQ+ VSRS++E+E RAL+  AC+L W++ L ++L+
Sbjct: 1270 RKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLR 1325


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  200 bits (509), Expect = 1e-49
 Identities = 92/176 (52%), Positives = 127/176 (72%)
 Frame = -2

Query: 528  KYVHDMLVEAGLEHCKPLSLPVDTTVKLSLNDGFPIDDASLYRKLIGKLLYLTATRPDIA 349
            KY  D+L ++GL  CKP S P+DT++KL    G P  D S YR+++GKLLYL  TRPDIA
Sbjct: 986  KYCLDLLKDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIA 1045

Query: 348  YIVHHLSQFVQSPKAPHLLAVQRVLRYLKGTPYQGVFFSASSNLQLFAYSDSDWGACSDT 169
            +    LSQF+Q+P   H  A  RVLRYLK  P QG+FFS +S +QL  YSD+DW  C D+
Sbjct: 1046 FATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDS 1105

Query: 168  SRSVTGYCVFLGNSLVNWKSKKQSVVSRSTAESELRALAETACDLAWMVLLLSELQ 1
             +S++GYC F+G SLV+W++KKQ+ VSRS++E+E RAL+  AC+L W++ L ++L+
Sbjct: 1106 RKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLR 1161


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