BLASTX nr result

ID: Bupleurum21_contig00037508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037508
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ...    95   5e-18
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar...    95   5e-18
ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17

>ref|XP_002324074.1| predicted protein [Populus trichocarpa] gi|222867076|gb|EEF04207.1|
           predicted protein [Populus trichocarpa]
          Length = 636

 Score =  101 bits (251), Expect = 7e-20
 Identities = 43/51 (84%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   PLYIFKNLRICQDCHSAFKIISSVYNREIVMRDRNRFHKFKQGICSCSDYW 154
           PLYIFKNLRICQDCHSA KI+S +YNREIV+RDRNRFH FK G CSCSDYW
Sbjct: 586 PLYIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKHGSCSCSDYW 636


>ref|XP_002278719.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Vitis vinifera]
          Length = 632

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   PLYIFKNLRICQDCHSAFKIISSVYNREIVMRDRNRFHKFKQGICSCSDYW 154
           PL+IFKNLRICQDCHSA KI+S +YNREIV+RDRNRFH FK+G CSC DYW
Sbjct: 582 PLHIFKNLRICQDCHSAIKIVSKIYNREIVIRDRNRFHCFKEGSCSCCDYW 632


>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319557|gb|EFH49979.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 623

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   PLYIFKNLRICQDCHSAFKIISSVYNREIVMRDRNRFHKFKQGICSCSDYW 154
           PL +FKNLRIC+DCHSA KI+S VY+REI++RDRNRFH+FK G CSCSDYW
Sbjct: 573 PLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623


>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15340, mitochondrial; Flags: Precursor
           gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
           thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 623

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = +2

Query: 2   PLYIFKNLRICQDCHSAFKIISSVYNREIVMRDRNRFHKFKQGICSCSDYW 154
           PL +FKNLRIC+DCHSA KI+S VY+REI++RDRNRFH+FK G CSCSDYW
Sbjct: 573 PLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623


>ref|XP_003554900.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
           mitochondrial-like [Glycine max]
          Length = 629

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/51 (80%), Positives = 43/51 (84%)
 Frame = +2

Query: 2   PLYIFKNLRICQDCHSAFKIISSVYNREIVMRDRNRFHKFKQGICSCSDYW 154
           PL IFKNLRICQDCHSA KI S +Y REIV+RDR RFH FKQG CSCSDYW
Sbjct: 579 PLCIFKNLRICQDCHSAIKIASDIYKREIVVRDRYRFHSFKQGSCSCSDYW 629


Top