BLASTX nr result

ID: Bupleurum21_contig00037477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037477
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...   256   4e-66
emb|CBI15033.3| unnamed protein product [Vitis vinifera]              250   2e-64
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...   214   1e-53
ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threo...   192   6e-47
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara...   155   6e-36

>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score =  256 bits (653), Expect = 4e-66
 Identities = 127/242 (52%), Positives = 176/242 (72%)
 Frame = +1

Query: 1    IWSCLMRGLPMFSTITTVADAALILLGNIISSDLADSFTISQDVWDLRLFKSSPSMSLLC 180
            IWSCLM GLP+FS IT+V DAAL+LLGNI+S+DL  +  + Q++WDLRLFK  PS+S+L 
Sbjct: 411  IWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVLY 470

Query: 181  FISCYFSRRGSQGDMRDALHLRQNLLRTVLSVFSWKDTTIFDEKMTLCLPAAVIALCSGY 360
            FISCYFSR+GSQGD+RD LHLRQNLLR VL +  WK++ I +E+M + LPA V ALC+G 
Sbjct: 471  FISCYFSRKGSQGDLRDILHLRQNLLRAVLGLLEWKESFILNERMVVLLPATVYALCTGC 530

Query: 361  ASFPHSDGGLVASNCFLDPHVKADNLAMAEEHDQAICYELYACTPEVLAEINIDSGSKIC 540
              F     GL+ S+ FL    + ++     E+++   +E++ C+ EVLAEI++ S  K+ 
Sbjct: 531  VPFTDCYKGLLISHSFLGVPDRIEDWLKTGEYERESLHEVFECSVEVLAEIDLSSSVKVS 590

Query: 541  QSRQCQSVRLPRQIRDPLLHEMEDCILEVVLDERIGMLSLSELVFMSALISNFMYSSHIT 720
            Q +  Q+VRLPRQ+RDPLL+EME  IL  V ++  G + LS++ FM AL+SNF+YS+ +T
Sbjct: 591  QPQCHQNVRLPRQLRDPLLNEMETFILATVGEKDSGKMLLSDVFFMCALLSNFIYSAFLT 650

Query: 721  RI 726
            R+
Sbjct: 651  RL 652


>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  250 bits (639), Expect = 2e-64
 Identities = 127/242 (52%), Positives = 175/242 (72%)
 Frame = +1

Query: 1    IWSCLMRGLPMFSTITTVADAALILLGNIISSDLADSFTISQDVWDLRLFKSSPSMSLLC 180
            IWSCLM GLP+FS IT+V DAAL+LLGNI+S+DL  +  + Q++WDLRLFK  PS+S+L 
Sbjct: 480  IWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVSVLY 539

Query: 181  FISCYFSRRGSQGDMRDALHLRQNLLRTVLSVFSWKDTTIFDEKMTLCLPAAVIALCSGY 360
            FISCYFSR+GSQGD+RD LHLRQNLLR VL +  WK + I +E+M + LPA V ALC+G 
Sbjct: 540  FISCYFSRKGSQGDLRDILHLRQNLLRAVLGLLEWK-SFILNERMVVLLPATVYALCTGC 598

Query: 361  ASFPHSDGGLVASNCFLDPHVKADNLAMAEEHDQAICYELYACTPEVLAEINIDSGSKIC 540
              F     GL+ S+ FL    + ++     E+++   +E++ C+ EVLAEI++ S  K+ 
Sbjct: 599  VPFTDCYKGLLISHSFLGVPDRIEDWLKTGEYERESLHEVFECSVEVLAEIDLSSSVKVS 658

Query: 541  QSRQCQSVRLPRQIRDPLLHEMEDCILEVVLDERIGMLSLSELVFMSALISNFMYSSHIT 720
            Q +  Q+VRLPRQ+RDPLL+EME  IL  V ++  G + LS++ FM AL+SNF+YS+ +T
Sbjct: 659  QPQCHQNVRLPRQLRDPLLNEMETFILATVGEKDSGKMLLSDVFFMCALLSNFIYSAFLT 718

Query: 721  RI 726
            R+
Sbjct: 719  RL 720


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
            gi|223550511|gb|EEF51998.1| ataxia telangiectasia
            mutated, putative [Ricinus communis]
          Length = 2954

 Score =  214 bits (546), Expect = 1e-53
 Identities = 110/241 (45%), Positives = 161/241 (66%)
 Frame = +1

Query: 1    IWSCLMRGLPMFSTITTVADAALILLGNIISSDLADSFTISQDVWDLRLFKSSPSMSLLC 180
            IWS L+ GLP+FS  T+V +AAL+LLGNI++SD+ + F + QD+WDL+LFK  PS  +L 
Sbjct: 417  IWSHLIHGLPLFSNSTSVVNAALLLLGNILTSDMMNIFVVPQDIWDLKLFKQMPSRCVLY 476

Query: 181  FISCYFSRRGSQGDMRDALHLRQNLLRTVLSVFSWKDTTIFDEKMTLCLPAAVIALCSGY 360
            FI+CYFS +GSQGD+RD+LHLR+NLL T+L   +WKDT+I +E M +  PAAV ALC+G 
Sbjct: 477  FIACYFSHKGSQGDLRDSLHLRKNLLTTILGYLNWKDTSILNEHMVVLFPAAVYALCAGC 536

Query: 361  ASFPHSDGGLVASNCFLDPHVKADNLAMAEEHDQAICYELYACTPEVLAEINIDSGSKIC 540
            A F H   GL+ S+        + + A   E +    YE + C+ EVLA+I++ S  ++ 
Sbjct: 537  APFTHCYKGLLPSHNL----EASGDWAKTYEDECERLYEPFECSVEVLAKIDLGSTVELA 592

Query: 541  QSRQCQSVRLPRQIRDPLLHEMEDCILEVVLDERIGMLSLSELVFMSALISNFMYSSHIT 720
             S+  +SV LP ++RD L+HEME  I   + D++   + L + +F   L+SNF++ S +T
Sbjct: 593  SSQCNRSVSLPCELRDTLMHEMETHIFGALGDKQTEKMPLCDAIFTCGLLSNFIHGSLVT 652

Query: 721  R 723
            R
Sbjct: 653  R 653


>ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase
            ATM-like [Cucumis sativus]
          Length = 2985

 Score =  192 bits (488), Expect = 6e-47
 Identities = 108/241 (44%), Positives = 147/241 (60%)
 Frame = +1

Query: 1    IWSCLMRGLPMFSTITTVADAALILLGNIISSDLADSFTISQDVWDLRLFKSSPSMSLLC 180
            IWSCLM GLPMF+ +  VA+AAL+LLG II  D      I QDVW+   FK  PS+S L 
Sbjct: 423  IWSCLMHGLPMFTHVFVVAEAALLLLGKIIERDSMKMCVIPQDVWEHLFFKRMPSISALY 482

Query: 181  FISCYFSRRGSQGDMRDALHLRQNLLRTVLSVFSWKDTTIFDEKMTLCLPAAVIALCSGY 360
             ISCYFSR+GSQGD+RD  HLR+NLLR VL + + KD   F+E++   LPAAV ALC+G 
Sbjct: 483  LISCYFSRKGSQGDLRDIFHLRKNLLRAVLGLLNLKDVASFNEQLIFLLPAAVYALCAGC 542

Query: 361  ASFPHSDGGLVASNCFLDPHVKADNLAMAEEHDQAICYELYACTPEVLAEINIDSGSKIC 540
            A  P  D   V+  C     +K D      +  Q    E++ C+ E++A+I++ S  KIC
Sbjct: 543  A--PSRDVTGVSDEC-----LKKDVKETYRDWSQ----EIFECSVEIVAKIHLGSSVKIC 591

Query: 541  QSRQCQSVRLPRQIRDPLLHEMEDCILEVVLDERIGMLSLSELVFMSALISNFMYSSHIT 720
             +R  +++ LPR IRDPLL EM   +L  ++D     L  S +  + AL++NF+  S + 
Sbjct: 592  PTRGHKAIHLPRHIRDPLLEEMVATVLGALIDMEREKLLPSSIFILCALLANFIDGSTLI 651

Query: 721  R 723
            R
Sbjct: 652  R 652


>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
          Length = 3856

 Score =  155 bits (393), Expect = 6e-36
 Identities = 94/242 (38%), Positives = 140/242 (57%), Gaps = 1/242 (0%)
 Frame = +1

Query: 1    IWSCLMRGLPMFSTITTVADAALILLGNIISSDLADSFTISQDVWDLRLFKSSPSMSLLC 180
            IWS L+ GL  FS+++ + DA L+LLG+IISS+      + Q+VWD +LF+  PS   L 
Sbjct: 1289 IWSSLIHGLATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWDHQLFRHIPSEPALY 1348

Query: 181  FISCYFSRRGSQGDMRDALHLRQNLLRTVLSVFSWKDTTIFDEKMTLCLPAAVIALCSGY 360
            FI+CYFSR G QG+++D LHLR+NLLR V +  SWK     DE+M   LPAA  +LC+G+
Sbjct: 1349 FIACYFSRMGCQGNLQDDLHLRRNLLRAVCAPLSWKVRLTLDERMVQLLPAAAFSLCAGF 1408

Query: 361  -ASFPHSDGGLVASNCFLDPHVKADNLAMAEEHDQAICYELYACTPEVLAEINIDSGSKI 537
              S P     L   +       + D     ++ D+   + L+ C+ E L  I   + SKI
Sbjct: 1409 KVSLPLPKEHLPTPS-------QWDVCEQIDDVDRERNFGLFECSVEALTRI-CSNSSKI 1460

Query: 538  CQSRQCQSVRLPRQIRDPLLHEMEDCILEVVLDERIGMLSLSELVFMSALISNFMYSSHI 717
               +    V+LP  +RDPLLH+M+   L ++ + +     LS++    AL+ +FM+ S+I
Sbjct: 1461 SGCQVPDVVQLPLVLRDPLLHDMDIYFLSIIPEVK-EKGPLSDIFMGCALLCHFMHGSYI 1519

Query: 718  TR 723
            TR
Sbjct: 1520 TR 1521


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