BLASTX nr result

ID: Bupleurum21_contig00037411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037411
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517647.1| AMP-activated protein kinase, gamma regulato...   169   2e-40
ref|NP_001233959.1| SNF4 protein [Solanum lycopersicum] gi|76727...   167   8e-40
ref|XP_002265369.1| PREDICTED: SNF1-related protein kinase regul...   162   3e-38
emb|CAN64662.1| hypothetical protein VITISV_035347 [Vitis vinifera]   162   3e-38
ref|XP_004152338.1| PREDICTED: SNF1-related protein kinase regul...   156   1e-36

>ref|XP_002517647.1| AMP-activated protein kinase, gamma regulatory subunit, putative
           [Ricinus communis] gi|223543279|gb|EEF44811.1|
           AMP-activated protein kinase, gamma regulatory subunit,
           putative [Ricinus communis]
          Length = 403

 Score =  169 bits (429), Expect = 2e-40
 Identities = 87/121 (71%), Positives = 99/121 (81%), Gaps = 3/121 (2%)
 Frame = -1

Query: 354 MILESDKQTGVVRKHYIGMVTMLDILXXXXXXXXXXXXXXD---LEKRMAVPVSSLIGQC 184
           MI+ESDKQTG VRKHYIGMVTMLDIL              D   L+++M+VPVSS+IG C
Sbjct: 99  MIMESDKQTGAVRKHYIGMVTMLDILAHIAGDDQMNGGDDDASDLDRKMSVPVSSIIGHC 158

Query: 183 LESLSLWTLNPNTSILDCMEVFSKGIHRALVPMDSQMENVAGVELVESASCYQMITQMDL 4
           LE LSLWTLNPNTSILDCMEVFSKGIHRALVP+DS MEN++GVELVESAS Y+M+TQMDL
Sbjct: 159 LEGLSLWTLNPNTSILDCMEVFSKGIHRALVPLDSHMENISGVELVESASSYRMLTQMDL 218

Query: 3   L 1
           +
Sbjct: 219 V 219


>ref|NP_001233959.1| SNF4 protein [Solanum lycopersicum]
           gi|7672780|gb|AAF66638.1|AF143742_1 SNF4 [Solanum
           lycopersicum] gi|16119022|gb|AAL14707.1|AF419320_1 SNF4
           [Solanum lycopersicum]
          Length = 373

 Score =  167 bits (423), Expect = 8e-40
 Identities = 85/118 (72%), Positives = 96/118 (81%)
 Frame = -1

Query: 354 MILESDKQTGVVRKHYIGMVTMLDILXXXXXXXXXXXXXXDLEKRMAVPVSSLIGQCLES 175
           MILESDKQTG VRKHYIGMVTMLDIL               L K+M VPVSS+IG CLES
Sbjct: 77  MILESDKQTGAVRKHYIGMVTMLDILAYIAGNGYRDDDDD-LTKKMMVPVSSIIGHCLES 135

Query: 174 LSLWTLNPNTSILDCMEVFSKGIHRALVPMDSQMENVAGVELVESASCYQMITQMDLL 1
           LSLWTL+PNTSI+DCMEVFSKGIHRA+VP++ ++ENV GVEL ESASCY+M+TQMDLL
Sbjct: 136 LSLWTLSPNTSIVDCMEVFSKGIHRAMVPVNGRLENVVGVELTESASCYRMLTQMDLL 193


>ref|XP_002265369.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-like PV42a [Vitis vinifera]
           gi|297743469|emb|CBI36336.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/118 (70%), Positives = 94/118 (79%)
 Frame = -1

Query: 354 MILESDKQTGVVRKHYIGMVTMLDILXXXXXXXXXXXXXXDLEKRMAVPVSSLIGQCLES 175
           MI+ESDKQTG VRKHYIGMVTMLDIL                E  M+VPVSS+IG CLE 
Sbjct: 65  MIMESDKQTGAVRKHYIGMVTMLDILGHIGGGDGDGFD---FEGIMSVPVSSIIGHCLEG 121

Query: 174 LSLWTLNPNTSILDCMEVFSKGIHRALVPMDSQMENVAGVELVESASCYQMITQMDLL 1
           LSLWTLNP+TSILDCME+FSKGIHRALVP+DS MEN++GVEL ESAS Y+M+TQMD+L
Sbjct: 122 LSLWTLNPHTSILDCMEMFSKGIHRALVPLDSHMENISGVELAESASSYRMLTQMDVL 179


>emb|CAN64662.1| hypothetical protein VITISV_035347 [Vitis vinifera]
          Length = 361

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/118 (70%), Positives = 94/118 (79%)
 Frame = -1

Query: 354 MILESDKQTGVVRKHYIGMVTMLDILXXXXXXXXXXXXXXDLEKRMAVPVSSLIGQCLES 175
           MI+ESDKQTG VRKHYIGMVTMLDIL                E  M+VPVSS+IG CLE 
Sbjct: 65  MIMESDKQTGAVRKHYIGMVTMLDILGHIGGGDGDGFD---FEGIMSVPVSSIIGHCLEG 121

Query: 174 LSLWTLNPNTSILDCMEVFSKGIHRALVPMDSQMENVAGVELVESASCYQMITQMDLL 1
           LSLWTLNP+TSILDCME+FSKGIHRALVP+DS MEN++GVEL ESAS Y+M+TQMD+L
Sbjct: 122 LSLWTLNPHTSILDCMEMFSKGIHRALVPLDSHMENISGVELAESASSYRMLTQMDVL 179


>ref|XP_004152338.1| PREDICTED: SNF1-related protein kinase regulatory subunit
           gamma-like PV42a-like [Cucumis sativus]
           gi|449525654|ref|XP_004169831.1| PREDICTED: SNF1-related
           protein kinase regulatory subunit gamma-like PV42a-like
           [Cucumis sativus]
          Length = 373

 Score =  156 bits (395), Expect = 1e-36
 Identities = 81/122 (66%), Positives = 96/122 (78%), Gaps = 4/122 (3%)
 Frame = -1

Query: 354 MILESDKQTGVVRKHYIGMVTMLDILXXXXXXXXXXXXXXD----LEKRMAVPVSSLIGQ 187
           MI+ESDK+TGV+RKHYIGMVTMLDIL              D    L+++MAVPVS++IG 
Sbjct: 69  MIMESDKRTGVLRKHYIGMVTMLDILAHIAGDDHDGDGGRDDLIDLDRKMAVPVSNIIGH 128

Query: 186 CLESLSLWTLNPNTSILDCMEVFSKGIHRALVPMDSQMENVAGVELVESASCYQMITQMD 7
            +E LSLWTLNPNTSILDCME+FSKGIHRALVP+D Q+E   GVELVESAS Y+M+TQMD
Sbjct: 129 NVEGLSLWTLNPNTSILDCMEIFSKGIHRALVPVDGQVEEAVGVELVESASSYRMLTQMD 188

Query: 6   LL 1
           +L
Sbjct: 189 VL 190


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