BLASTX nr result

ID: Bupleurum21_contig00037402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037402
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   144   1e-32
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   140   1e-31
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   115   5e-24
ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [S...   113   2e-23

>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/135 (49%), Positives = 89/135 (65%)
 Frame = +2

Query: 32  FSRNHIDIFIKLPTMRTWRLTCIYGEPKRSLRRNTWELIKGLNSHFNIPWCLIGDFNNLG 211
           +S++HID+ +       WR+T  YG P RS R  +W L++ L S  ++PWC +GDFN++ 
Sbjct: 389 YSQSHIDMEVSEEDGLQWRVTGFYGFPDRSQRHLSWNLLRSLYSASSLPWCCLGDFNDIV 448

Query: 212 NQDEKRGGRRYPTWLIEGFQNMLMECNLIDLELHGYQYTWERGRGSAVWVEERLDKALVT 391
             +EKRG   +P WLI GF   L +C L DL L GY +TWERGRGS+ WVEE LD+ALV 
Sbjct: 449 CNEEKRGSVPHPPWLIRGFCAALSDCQLQDLXLKGYPFTWERGRGSSHWVEEXLDRALVN 508

Query: 392 HSWLQIFNSAKLVNI 436
            SWL +F  AKL N+
Sbjct: 509 VSWLNLFXBAKLNNL 523


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  140 bits (352), Expect = 1e-31
 Identities = 65/147 (44%), Positives = 94/147 (63%)
 Frame = +2

Query: 11  DTVEFKSFSRNHIDIFIKLPTMRTWRLTCIYGEPKRSLRRNTWELIKGLNSHFNIPWCLI 190
           D V        +ID  + L   R +RLT  YG   RS R ++WE+++ L++  ++PWC+I
Sbjct: 417 DKVTILGSHDRYIDAIVTLENQRMFRLTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVI 476

Query: 191 GDFNNLGNQDEKRGGRRYPTWLIEGFQNMLMECNLIDLELHGYQYTWERGRGSAVWVEER 370
           GDFN L +Q EK G   +P  LIE F+ ++  C L DL   GY YTWERGRG+  WVEER
Sbjct: 477 GDFNELMHQSEKCGNHPHPGSLIEAFRQVVTNCGLSDLGYVGYAYTWERGRGTTRWVEER 536

Query: 371 LDKALVTHSWLQIFNSAKLVNIELSTS 451
           LD+ALV+  W  +F+ ++L+++ +STS
Sbjct: 537 LDRALVSADWKHLFHQSRLIHLFVSTS 563


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  124 bits (310), Expect = 1e-26
 Identities = 54/150 (36%), Positives = 90/150 (60%)
 Frame = +2

Query: 2   KDNDTVEFKSFSRNHIDIFIKLPTMRTWRLTCIYGEPKRSLRRNTWELIKGLNSHFNIPW 181
           + + +V    +S NHID+ +       WR T  YG P R+ +  +W L++ L+    +PW
Sbjct: 58  RSSASVSLLGYSNNHIDLLVVEANNFIWRFTGYYGLPDRNRKMESWNLLRALSRQSALPW 117

Query: 182 CLIGDFNNLGNQDEKRGGRRYPTWLIEGFQNMLMECNLIDLELHGYQYTWERGRGSAVWV 361
             +GD+N++   +EKRG   +P    +GF+  + +C L D+ L GY +TWERGRG+A W+
Sbjct: 118 VCMGDYNDMLCAEEKRGRVLHPNSSFQGFREAVEDCKLTDMPLIGYPFTWERGRGTAEWI 177

Query: 362 EERLDKALVTHSWLQIFNSAKLVNIELSTS 451
           +ER+D+A+ + SW   F+ A+L  +  S+S
Sbjct: 178 QERIDRAMCSDSWFDYFDRAELHILTCSSS 207


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/120 (45%), Positives = 74/120 (61%)
 Frame = +2

Query: 11   DTVEFKSFSRNHIDIFIKLPTMRTWRLTCIYGEPKRSLRRNTWELIKGLNSHFNIPWCLI 190
            D V        +ID  + L   R +RLT  YG   +S R ++WE+++ L++  ++PWC+I
Sbjct: 709  DKVTILGSHDRYIDATVTLENQRMFRLTGFYGLANKSQRSSSWEILRNLHAAHSLPWCVI 768

Query: 191  GDFNNLGNQDEKRGGRRYPTWLIEGFQNMLMECNLIDLELHGYQYTWERGRGSAVWVEER 370
            GDFN L +Q EKRG   +P  LIE F+  + +C L DL   GY YTWERGRG+  WVEER
Sbjct: 769  GDFNELMHQFEKRGNHPHPGSLIEAFRQAVTDCGLSDLGYVGYAYTWERGRGTTRWVEER 828


>ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor]
           gi|241934144|gb|EES07289.1| hypothetical protein
           SORBIDRAFT_04g028482 [Sorghum bicolor]
          Length = 509

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/142 (39%), Positives = 82/142 (57%)
 Frame = +2

Query: 2   KDNDTVEFKSFSRNHIDIFIKLPTMRTWRLTCIYGEPKRSLRRNTWELIKGLNSHFNIPW 181
           K++  V  K FS+ HID  I+      WR++ IYGEP RSLR  TW+++K + S F++PW
Sbjct: 269 KNDVNVSIKKFSKYHIDTIIEENGKEPWRMSFIYGEPNRSLRHRTWDIMKQMRSDFDLPW 328

Query: 182 CLIGDFNNLGNQDEKRGGRRYPTWLIEGFQNMLMECNLIDLELHGYQYTWERGRGSAVWV 361
             IGDFN +  +DE+ G      +L+EGF+  +  C L D+   G  +T+E+      +V
Sbjct: 329 LCIGDFNEILRRDEQLGPNIREDYLMEGFREAVDVCQLCDIGYMGLDWTFEKKVAGGHFV 388

Query: 362 EERLDKALVTHSWLQIFNSAKL 427
             RLD+AL + SW   F  A L
Sbjct: 389 RVRLDRALASASWSSYFPFAVL 410


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