BLASTX nr result

ID: Bupleurum21_contig00037273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037273
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    75   4e-12
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    73   2e-11
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    73   2e-11
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    72   6e-11
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    71   8e-11

>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/105 (36%), Positives = 63/105 (60%)
 Frame = +1

Query: 1   VLAMEVFSCIIDKKTASTGFCYHWKTERNRISHLFFADDIIMLSRGDVDSVRYLLEATSE 180
           V++M V S ++DK T    F YH + ++  ++HL FADD+++LS G V S+  ++E    
Sbjct: 50  VVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFET 109

Query: 181 FTQISGLCLNLQKSLCFFGNVDDHTVQSIMRLTGFARGDLPITYL 315
           F + SGL ++++KS  +F  +   + Q +M    FA G LP+ YL
Sbjct: 110 FAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYL 154


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/105 (35%), Positives = 61/105 (58%)
 Frame = +1

Query: 1    VLAMEVFSCIIDKKTASTGFCYHWKTERNRISHLFFADDIIMLSRGDVDSVRYLLEATSE 180
            V+ ME     + K   +  F +H K E+  +++L FADD+++  RGD  SV  ++E   +
Sbjct: 977  VIIMEYLHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRK 1036

Query: 181  FTQISGLCLNLQKSLCFFGNVDDHTVQSIMRLTGFARGDLPITYL 315
            F+  +GL +N  K   FFG +D  + +++ R+T FA G LP+ YL
Sbjct: 1037 FSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYL 1081


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/105 (35%), Positives = 61/105 (58%)
 Frame = +1

Query: 1    VLAMEVFSCIIDKKTASTGFCYHWKTERNRISHLFFADDIIMLSRGDVDSVRYLLEATSE 180
            V+ ME     + K   +  F +H K E+  +++L FADD+++  RGD  SV  ++E   +
Sbjct: 860  VIIMEYMHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRK 919

Query: 181  FTQISGLCLNLQKSLCFFGNVDDHTVQSIMRLTGFARGDLPITYL 315
            F+  +GL +N  K   FFG +D  + +++ R+T FA G LP+ YL
Sbjct: 920  FSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYL 964


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/105 (35%), Positives = 55/105 (52%)
 Frame = +1

Query: 1    VLAMEVFSCIIDKKTASTGFCYHWKTERNRISHLFFADDIIMLSRGDVDSVRYLLEATSE 180
            V+ M V S ++DK      F YH +     ++HL FADDI++ S G   S+  +L    +
Sbjct: 923  VICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKD 982

Query: 181  FTQISGLCLNLQKSLCFFGNVDDHTVQSIMRLTGFARGDLPITYL 315
            F   SGL ++L+KS  F  ++   T  SI+    F  G LP+ YL
Sbjct: 983  FAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYL 1027


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/104 (36%), Positives = 56/104 (53%)
 Frame = +1

Query: 4   LAMEVFSCIIDKKTASTGFCYHWKTERNRISHLFFADDIIMLSRGDVDSVRYLLEATSEF 183
           L ME  S  +++   S  F +H K ER  I+HL FADD++M  R D  S+ ++  A  +F
Sbjct: 654 LCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKF 713

Query: 184 TQISGLCLNLQKSLCFFGNVDDHTVQSIMRLTGFARGDLPITYL 315
           +  SGL  + +KS  +F  VDD T + +        G+LP  YL
Sbjct: 714 SHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYL 757


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