BLASTX nr result

ID: Bupleurum21_contig00037224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00037224
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33924.3| unnamed protein product [Vitis vinifera]              199   3e-49
ref|XP_002329587.1| hypothetical protein POPTRDRAFT_264663 [Popu...   199   3e-49
ref|XP_002278917.1| PREDICTED: expansin-like B1 [Vitis vinifera]      199   3e-49
ref|XP_002326498.1| hypothetical protein POPTRDRAFT_423586 [Popu...   197   1e-48
ref|XP_002528779.1| Major pollen allergen Ory s 1 precursor, put...   193   1e-47

>emb|CBI33924.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  199 bits (505), Expect = 3e-49
 Identities = 94/111 (84%), Positives = 100/111 (90%)
 Frame = -1

Query: 335 TCSDCFVHSCAAYYPNSDEKGTESGACGYGTFGATINGGDVSAASDLYRAGVGCGACYQV 156
           TCSDCF HS AAYYPNSDE GTE+G CGYG+FGATIN GDVSAASDLYR GVGCGACYQV
Sbjct: 9   TCSDCFTHSRAAYYPNSDELGTETGQCGYGSFGATINDGDVSAASDLYRDGVGCGACYQV 68

Query: 155 RCSDSKYCSDKGVNVVITDQGSGPNTDFILSRRAFGRMAQTTDAAASLLAL 3
           RC++S YCSDKGV VVITD GSG  TDFI+S+RAFGRMAQTTDAAASLLAL
Sbjct: 69  RCTNSNYCSDKGVTVVITDHGSGDRTDFIMSKRAFGRMAQTTDAAASLLAL 119


>ref|XP_002329587.1| hypothetical protein POPTRDRAFT_264663 [Populus trichocarpa]
           gi|222870296|gb|EEF07427.1| hypothetical protein
           POPTRDRAFT_264663 [Populus trichocarpa]
          Length = 232

 Score =  199 bits (505), Expect = 3e-49
 Identities = 91/111 (81%), Positives = 102/111 (91%)
 Frame = -1

Query: 335 TCSDCFVHSCAAYYPNSDEKGTESGACGYGTFGATINGGDVSAASDLYRAGVGCGACYQV 156
           TCSDCF+HS AAYYPNSDE GT++G CGYG+FGAT+NGGDV+AASDLYR GVGCGACYQV
Sbjct: 2   TCSDCFIHSRAAYYPNSDENGTDTGRCGYGSFGATLNGGDVAAASDLYRDGVGCGACYQV 61

Query: 155 RCSDSKYCSDKGVNVVITDQGSGPNTDFILSRRAFGRMAQTTDAAASLLAL 3
           +C++S YC+D GV +VITDQGS  NTDFILSRRAFGRMAQTTDAAASLLAL
Sbjct: 62  KCTNSYYCTDNGVTIVITDQGSSDNTDFILSRRAFGRMAQTTDAAASLLAL 112


>ref|XP_002278917.1| PREDICTED: expansin-like B1 [Vitis vinifera]
          Length = 255

 Score =  199 bits (505), Expect = 3e-49
 Identities = 94/111 (84%), Positives = 100/111 (90%)
 Frame = -1

Query: 335 TCSDCFVHSCAAYYPNSDEKGTESGACGYGTFGATINGGDVSAASDLYRAGVGCGACYQV 156
           TCSDCF HS AAYYPNSDE GTE+G CGYG+FGATIN GDVSAASDLYR GVGCGACYQV
Sbjct: 26  TCSDCFTHSRAAYYPNSDELGTETGQCGYGSFGATINDGDVSAASDLYRDGVGCGACYQV 85

Query: 155 RCSDSKYCSDKGVNVVITDQGSGPNTDFILSRRAFGRMAQTTDAAASLLAL 3
           RC++S YCSDKGV VVITD GSG  TDFI+S+RAFGRMAQTTDAAASLLAL
Sbjct: 86  RCTNSNYCSDKGVTVVITDHGSGDRTDFIMSKRAFGRMAQTTDAAASLLAL 136


>ref|XP_002326498.1| hypothetical protein POPTRDRAFT_423586 [Populus trichocarpa]
           gi|222833820|gb|EEE72297.1| hypothetical protein
           POPTRDRAFT_423586 [Populus trichocarpa]
          Length = 230

 Score =  197 bits (500), Expect = 1e-48
 Identities = 90/111 (81%), Positives = 100/111 (90%)
 Frame = -1

Query: 335 TCSDCFVHSCAAYYPNSDEKGTESGACGYGTFGATINGGDVSAASDLYRAGVGCGACYQV 156
           TCSDCF+HS AAYYPNS E GT++G CGYG+FGAT+NGGDVSA SDLYR GVGCGACYQV
Sbjct: 2   TCSDCFIHSRAAYYPNSYENGTDTGRCGYGSFGATLNGGDVSAVSDLYRDGVGCGACYQV 61

Query: 155 RCSDSKYCSDKGVNVVITDQGSGPNTDFILSRRAFGRMAQTTDAAASLLAL 3
           RC+DS YC+DKGV +V+TD GS  NTDFILSRRAFGRMAQTTDAAASL+AL
Sbjct: 62  RCTDSHYCTDKGVTIVVTDHGSSHNTDFILSRRAFGRMAQTTDAAASLIAL 112


>ref|XP_002528779.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus
           communis] gi|223531782|gb|EEF33601.1| Major pollen
           allergen Ory s 1 precursor, putative [Ricinus communis]
          Length = 256

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/111 (81%), Positives = 100/111 (90%)
 Frame = -1

Query: 335 TCSDCFVHSCAAYYPNSDEKGTESGACGYGTFGATINGGDVSAASDLYRAGVGCGACYQV 156
           TCSDCF HS AAYYPNSDE+GT+ GACG+G+FGATINGGDVSAAS+LYR GVGCG+CYQV
Sbjct: 26  TCSDCFTHSQAAYYPNSDEQGTDRGACGFGSFGATINGGDVSAASNLYRDGVGCGSCYQV 85

Query: 155 RCSDSKYCSDKGVNVVITDQGSGPNTDFILSRRAFGRMAQTTDAAASLLAL 3
           RC +S YC+DKGV + ITDQGS  N DFILSRRAFGRMAQTTDAAASLL+L
Sbjct: 86  RCINSNYCTDKGVVITITDQGSSGNADFILSRRAFGRMAQTTDAAASLLSL 136


Top